Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21585 and SM_b21586 are separated by 14 nucleotides SM_b21586 and SM_b21587 are separated by 151 nucleotides
SM_b21585: SM_b21585 - hypothetical protein, at 1,123,796 to 1,125,682
_b21585
SM_b21586: SM_b21586 - glutathione synthetase, at 1,125,697 to 1,126,743
_b21586
SM_b21587: SM_b21587 - sugar uptake ABC transporter substrate-binding protein precursor, at 1,126,895 to 1,127,857
_b21587
Position (kb)
1125
1126
1127 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1124.748 kb on - strand, within SM_b21585 at 1124.756 kb on + strand, within SM_b21585 at 1124.757 kb on - strand, within SM_b21585 at 1124.757 kb on - strand, within SM_b21585 at 1124.847 kb on - strand, within SM_b21585 at 1124.847 kb on - strand, within SM_b21585 at 1124.847 kb on - strand, within SM_b21585 at 1125.162 kb on - strand, within SM_b21585 at 1125.162 kb on - strand, within SM_b21585 at 1125.670 kb on + strand at 1125.670 kb on + strand at 1125.671 kb on - strand at 1125.671 kb on - strand at 1125.671 kb on - strand at 1125.683 kb on + strand at 1125.683 kb on + strand at 1125.684 kb on - strand at 1125.742 kb on + strand at 1125.743 kb on - strand at 1125.745 kb on + strand at 1125.747 kb on + strand at 1125.748 kb on - strand at 1125.748 kb on - strand at 1125.748 kb on - strand at 1125.748 kb on - strand at 1125.799 kb on + strand at 1125.800 kb on - strand at 1125.800 kb on - strand at 1125.800 kb on - strand at 1125.800 kb on - strand at 1125.800 kb on - strand at 1125.871 kb on - strand, within SM_b21586 at 1125.871 kb on - strand, within SM_b21586 at 1125.954 kb on - strand, within SM_b21586 at 1125.954 kb on - strand, within SM_b21586 at 1125.954 kb on - strand, within SM_b21586 at 1126.016 kb on - strand, within SM_b21586 at 1126.016 kb on - strand, within SM_b21586 at 1126.068 kb on - strand, within SM_b21586 at 1126.108 kb on + strand, within SM_b21586 at 1126.108 kb on + strand, within SM_b21586 at 1126.109 kb on - strand, within SM_b21586 at 1126.313 kb on - strand, within SM_b21586 at 1126.330 kb on + strand, within SM_b21586 at 1126.502 kb on + strand, within SM_b21586 at 1126.502 kb on + strand, within SM_b21586 at 1126.503 kb on - strand, within SM_b21586 at 1126.567 kb on - strand, within SM_b21586 at 1126.567 kb on - strand, within SM_b21586 at 1126.568 kb on + strand, within SM_b21586 at 1126.568 kb on + strand, within SM_b21586 at 1126.568 kb on + strand, within SM_b21586 at 1126.568 kb on + strand, within SM_b21586 at 1127.261 kb on + strand, within SM_b21587 at 1127.261 kb on + strand, within SM_b21587 at 1127.434 kb on + strand, within SM_b21587 at 1127.434 kb on + strand, within SM_b21587 at 1127.434 kb on + strand, within SM_b21587 at 1127.434 kb on + strand, within SM_b21587 at 1127.435 kb on - strand, within SM_b21587 at 1127.546 kb on + strand, within SM_b21587
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 1,124,748 - SM_b21585 0.50 +0.8 1,124,756 + SM_b21585 0.51 -3.4 1,124,757 - SM_b21585 0.51 +0.2 1,124,757 - SM_b21585 0.51 -0.1 1,124,847 - SM_b21585 0.56 -0.5 1,124,847 - SM_b21585 0.56 -0.5 1,124,847 - SM_b21585 0.56 -0.7 1,125,162 - SM_b21585 0.72 +1.4 1,125,162 - SM_b21585 0.72 +0.7 1,125,670 + +1.5 1,125,670 + +0.2 1,125,671 - +1.3 1,125,671 - +1.6 1,125,671 - +1.2 1,125,683 + -1.0 1,125,683 + -2.3 1,125,684 - -0.3 1,125,742 + -3.0 1,125,743 - -2.3 1,125,745 + -1.9 1,125,747 + -2.7 1,125,748 - +0.6 1,125,748 - -0.2 1,125,748 - -3.7 1,125,748 - +2.6 1,125,799 + +0.7 1,125,800 - +1.9 1,125,800 - -0.6 1,125,800 - -1.6 1,125,800 - -1.6 1,125,800 - -0.3 1,125,871 - SM_b21586 0.17 +0.5 1,125,871 - SM_b21586 0.17 -1.1 1,125,954 - SM_b21586 0.25 -0.2 1,125,954 - SM_b21586 0.25 +0.1 1,125,954 - SM_b21586 0.25 -0.3 1,126,016 - SM_b21586 0.30 +0.1 1,126,016 - SM_b21586 0.30 -0.0 1,126,068 - SM_b21586 0.35 -1.2 1,126,108 + SM_b21586 0.39 +0.4 1,126,108 + SM_b21586 0.39 -0.4 1,126,109 - SM_b21586 0.39 -1.7 1,126,313 - SM_b21586 0.59 -2.1 1,126,330 + SM_b21586 0.60 -0.6 1,126,502 + SM_b21586 0.77 +1.2 1,126,502 + SM_b21586 0.77 +0.3 1,126,503 - SM_b21586 0.77 -0.0 1,126,567 - SM_b21586 0.83 -0.6 1,126,567 - SM_b21586 0.83 -0.0 1,126,568 + SM_b21586 0.83 -0.7 1,126,568 + SM_b21586 0.83 -3.5 1,126,568 + SM_b21586 0.83 +1.7 1,126,568 + SM_b21586 0.83 -1.6 1,127,261 + SM_b21587 0.38 -0.1 1,127,261 + SM_b21587 0.38 -0.8 1,127,434 + SM_b21587 0.56 -0.4 1,127,434 + SM_b21587 0.56 +3.2 1,127,434 + SM_b21587 0.56 +0.7 1,127,434 + SM_b21587 0.56 +0.0 1,127,435 - SM_b21587 0.56 -0.5 1,127,546 + SM_b21587 0.68 -0.4
Or see this region's nucleotide sequence