Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21526 and SM_b21527 are separated by 88 nucleotides SM_b21527 and SM_b21528 overlap by 8 nucleotides SM_b21528 and SM_b21670 are separated by 116 nucleotides SM_b21670 and SM_b21529 are separated by 24 nucleotides
SM_b21526: SM_b21526 - taurine uptake ABC transporter substrate-binding protein precursor, at 1,050,954 to 1,051,973
_b21526
SM_b21527: SM_b21527 - taurin uptake ABC transporter ATP-binding protein, at 1,052,062 to 1,052,874
_b21527
SM_b21528: SM_b21528 - taurine uptake ABC transporter permease, at 1,052,867 to 1,053,694
_b21528
SM_b21670: SM_b21670 - hypothetical protein, at 1,053,811 to 1,054,197
_b21670
SM_b21529: SM_b21529 - taurine dehydrogenase, at 1,054,222 to 1,055,622
_b21529
Position (kb)
1052
1053
1054 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1051.926 kb on + strand at 1051.927 kb on - strand at 1051.927 kb on - strand at 1051.950 kb on + strand at 1052.356 kb on - strand, within SM_b21527 at 1052.464 kb on + strand, within SM_b21527 at 1052.465 kb on - strand, within SM_b21527 at 1052.719 kb on - strand, within SM_b21527 at 1052.719 kb on - strand, within SM_b21527 at 1052.722 kb on + strand, within SM_b21527 at 1052.722 kb on + strand, within SM_b21527 at 1052.722 kb on + strand, within SM_b21527 at 1052.723 kb on - strand, within SM_b21527 at 1052.723 kb on - strand, within SM_b21527 at 1052.723 kb on - strand, within SM_b21527 at 1052.723 kb on - strand, within SM_b21527 at 1052.828 kb on - strand at 1052.915 kb on + strand at 1052.915 kb on + strand at 1052.915 kb on + strand at 1052.915 kb on + strand at 1052.917 kb on - strand at 1053.106 kb on + strand, within SM_b21528 at 1053.106 kb on + strand, within SM_b21528 at 1053.106 kb on + strand, within SM_b21528 at 1053.107 kb on - strand, within SM_b21528 at 1053.107 kb on - strand, within SM_b21528 at 1053.317 kb on + strand, within SM_b21528 at 1053.318 kb on - strand, within SM_b21528 at 1053.318 kb on - strand, within SM_b21528 at 1053.318 kb on - strand, within SM_b21528 at 1053.318 kb on - strand, within SM_b21528 at 1053.465 kb on + strand, within SM_b21528 at 1053.466 kb on - strand, within SM_b21528 at 1053.466 kb on - strand, within SM_b21528 at 1053.466 kb on - strand, within SM_b21528 at 1053.590 kb on - strand, within SM_b21528 at 1053.758 kb on + strand at 1053.758 kb on + strand at 1053.981 kb on - strand, within SM_b21670 at 1053.981 kb on - strand, within SM_b21670 at 1054.083 kb on + strand, within SM_b21670 at 1054.083 kb on + strand, within SM_b21670 at 1054.084 kb on - strand, within SM_b21670 at 1054.276 kb on + strand at 1054.276 kb on + strand at 1054.276 kb on + strand at 1054.277 kb on - strand at 1054.277 kb on - strand at 1054.318 kb on + strand at 1054.330 kb on + strand at 1054.331 kb on - strand at 1054.331 kb on - strand at 1054.422 kb on + strand, within SM_b21529 at 1054.422 kb on + strand, within SM_b21529 at 1054.422 kb on + strand, within SM_b21529 at 1054.422 kb on + strand, within SM_b21529 at 1054.423 kb on - strand, within SM_b21529
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 1,051,926 + -0.0 1,051,927 - -0.3 1,051,927 - -0.1 1,051,950 + +1.1 1,052,356 - SM_b21527 0.36 -0.4 1,052,464 + SM_b21527 0.49 +1.2 1,052,465 - SM_b21527 0.50 +1.0 1,052,719 - SM_b21527 0.81 +0.4 1,052,719 - SM_b21527 0.81 +1.2 1,052,722 + SM_b21527 0.81 -1.5 1,052,722 + SM_b21527 0.81 +0.9 1,052,722 + SM_b21527 0.81 -1.7 1,052,723 - SM_b21527 0.81 +0.5 1,052,723 - SM_b21527 0.81 +1.0 1,052,723 - SM_b21527 0.81 +0.6 1,052,723 - SM_b21527 0.81 +0.3 1,052,828 - -2.5 1,052,915 + +0.4 1,052,915 + +0.4 1,052,915 + +0.3 1,052,915 + -0.0 1,052,917 - -0.1 1,053,106 + SM_b21528 0.29 +0.7 1,053,106 + SM_b21528 0.29 -0.8 1,053,106 + SM_b21528 0.29 -2.2 1,053,107 - SM_b21528 0.29 -0.7 1,053,107 - SM_b21528 0.29 -0.9 1,053,317 + SM_b21528 0.54 -0.2 1,053,318 - SM_b21528 0.54 -0.5 1,053,318 - SM_b21528 0.54 +0.1 1,053,318 - SM_b21528 0.54 +0.8 1,053,318 - SM_b21528 0.54 -1.6 1,053,465 + SM_b21528 0.72 -2.8 1,053,466 - SM_b21528 0.72 -1.6 1,053,466 - SM_b21528 0.72 -1.3 1,053,466 - SM_b21528 0.72 -0.0 1,053,590 - SM_b21528 0.87 +0.1 1,053,758 + -0.7 1,053,758 + +0.2 1,053,981 - SM_b21670 0.44 -0.5 1,053,981 - SM_b21670 0.44 +0.7 1,054,083 + SM_b21670 0.70 +1.3 1,054,083 + SM_b21670 0.70 -0.4 1,054,084 - SM_b21670 0.71 -1.6 1,054,276 + -0.1 1,054,276 + -0.3 1,054,276 + +0.9 1,054,277 - -0.4 1,054,277 - +0.1 1,054,318 + -1.6 1,054,330 + -0.1 1,054,331 - +0.1 1,054,331 - +1.6 1,054,422 + SM_b21529 0.14 -0.8 1,054,422 + SM_b21529 0.14 +0.2 1,054,422 + SM_b21529 0.14 -0.5 1,054,422 + SM_b21529 0.14 -1.1 1,054,423 - SM_b21529 0.14 -0.2
Or see this region's nucleotide sequence