Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21472 and SM_b21473 are separated by 40 nucleotides SM_b21473 and SM_b21474 overlap by 4 nucleotides SM_b21474 and SM_b21475 are separated by 316 nucleotides SM_b21475 and SM_b21476 overlap by 1 nucleotides SM_b21476 and SM_b21477 overlap by 48 nucleotides
SM_b21472: SM_b21472 - hypothetical protein, at 1,398,286 to 1,398,825
_b21472
SM_b21473: SM_b21473 - hypothetical protein, at 1,398,866 to 1,399,300
_b21473
SM_b21474: SM_b21474 - 3-ketoacyl-ACP reductase, at 1,399,297 to 1,400,079
_b21474
SM_b21475: SM_b21475 - hypothetical protein, at 1,400,396 to 1,400,599
_b21475
SM_b21476: SM_b21476 - hypothetical protein, at 1,400,599 to 1,400,946
_b21476
SM_b21477: SM_b21477 - reverse transcriptasematurase, at 1,400,899 to 1,402,077
_b21477
Position (kb)
1399
1400
1401 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1398.308 kb on + strand at 1398.309 kb on - strand at 1398.438 kb on + strand, within SM_b21472 at 1398.452 kb on - strand, within SM_b21472 at 1398.488 kb on + strand, within SM_b21472 at 1398.489 kb on - strand, within SM_b21472 at 1398.489 kb on - strand, within SM_b21472 at 1398.495 kb on - strand at 1398.682 kb on + strand, within SM_b21472 at 1398.682 kb on + strand, within SM_b21472 at 1398.682 kb on + strand, within SM_b21472 at 1398.682 kb on + strand, within SM_b21472 at 1398.682 kb on + strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.683 kb on - strand, within SM_b21472 at 1398.686 kb on + strand, within SM_b21472 at 1398.686 kb on + strand, within SM_b21472 at 1398.686 kb on + strand, within SM_b21472 at 1398.687 kb on - strand, within SM_b21472 at 1398.768 kb on + strand, within SM_b21472 at 1398.769 kb on - strand at 1398.928 kb on + strand, within SM_b21473 at 1398.928 kb on + strand, within SM_b21473 at 1398.944 kb on - strand, within SM_b21473 at 1399.246 kb on - strand, within SM_b21473 at 1399.445 kb on + strand, within SM_b21474 at 1399.445 kb on + strand, within SM_b21474 at 1399.445 kb on + strand, within SM_b21474 at 1399.445 kb on + strand, within SM_b21474 at 1399.446 kb on - strand, within SM_b21474 at 1399.446 kb on - strand, within SM_b21474 at 1399.446 kb on - strand, within SM_b21474 at 1399.446 kb on - strand, within SM_b21474 at 1399.530 kb on + strand, within SM_b21474 at 1399.544 kb on + strand, within SM_b21474 at 1399.544 kb on + strand, within SM_b21474 at 1399.545 kb on - strand, within SM_b21474 at 1399.765 kb on + strand, within SM_b21474 at 1399.824 kb on + strand, within SM_b21474 at 1399.950 kb on + strand, within SM_b21474 at 1399.951 kb on - strand, within SM_b21474 at 1399.951 kb on - strand, within SM_b21474 at 1400.120 kb on + strand at 1400.120 kb on + strand at 1400.165 kb on - strand at 1400.165 kb on - strand at 1400.166 kb on + strand at 1400.167 kb on - strand at 1400.167 kb on - strand at 1400.167 kb on - strand at 1400.171 kb on + strand at 1400.171 kb on + strand at 1400.171 kb on + strand at 1400.210 kb on + strand at 1400.416 kb on + strand at 1400.557 kb on - strand, within SM_b21475 at 1400.597 kb on + strand at 1400.597 kb on + strand at 1400.597 kb on + strand at 1400.657 kb on + strand, within SM_b21476 at 1400.658 kb on - strand, within SM_b21476 at 1400.697 kb on + strand, within SM_b21476 at 1400.698 kb on - strand, within SM_b21476 at 1400.715 kb on - strand, within SM_b21476
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 1,398,308 + +0.4 1,398,309 - -1.4 1,398,438 + SM_b21472 0.28 +0.4 1,398,452 - SM_b21472 0.31 -0.9 1,398,488 + SM_b21472 0.37 -0.7 1,398,489 - SM_b21472 0.38 +1.6 1,398,489 - SM_b21472 0.38 +3.4 1,398,495 - -0.4 1,398,682 + SM_b21472 0.73 -0.7 1,398,682 + SM_b21472 0.73 -1.0 1,398,682 + SM_b21472 0.73 +1.2 1,398,682 + SM_b21472 0.73 -0.0 1,398,682 + SM_b21472 0.73 -4.0 1,398,683 - SM_b21472 0.74 -0.8 1,398,683 - SM_b21472 0.74 -0.6 1,398,683 - SM_b21472 0.74 +0.5 1,398,683 - SM_b21472 0.74 +1.6 1,398,683 - SM_b21472 0.74 +0.6 1,398,686 + SM_b21472 0.74 -0.8 1,398,686 + SM_b21472 0.74 -0.6 1,398,686 + SM_b21472 0.74 +1.2 1,398,687 - SM_b21472 0.74 -0.6 1,398,768 + SM_b21472 0.89 -1.1 1,398,769 - +1.2 1,398,928 + SM_b21473 0.14 -0.5 1,398,928 + SM_b21473 0.14 -0.9 1,398,944 - SM_b21473 0.18 -0.2 1,399,246 - SM_b21473 0.87 +1.0 1,399,445 + SM_b21474 0.19 -1.5 1,399,445 + SM_b21474 0.19 -2.1 1,399,445 + SM_b21474 0.19 +3.1 1,399,445 + SM_b21474 0.19 +0.9 1,399,446 - SM_b21474 0.19 +0.0 1,399,446 - SM_b21474 0.19 -0.1 1,399,446 - SM_b21474 0.19 -0.8 1,399,446 - SM_b21474 0.19 +0.2 1,399,530 + SM_b21474 0.30 +0.6 1,399,544 + SM_b21474 0.32 -2.7 1,399,544 + SM_b21474 0.32 +0.7 1,399,545 - SM_b21474 0.32 -0.9 1,399,765 + SM_b21474 0.60 -1.8 1,399,824 + SM_b21474 0.67 -1.3 1,399,950 + SM_b21474 0.83 -0.9 1,399,951 - SM_b21474 0.84 -2.1 1,399,951 - SM_b21474 0.84 -0.8 1,400,120 + +0.5 1,400,120 + +1.7 1,400,165 - +1.2 1,400,165 - +1.1 1,400,166 + -1.7 1,400,167 - +0.5 1,400,167 - +0.3 1,400,167 - -0.8 1,400,171 + -1.0 1,400,171 + +0.2 1,400,171 + -2.1 1,400,210 + -0.1 1,400,416 + -0.7 1,400,557 - SM_b21475 0.79 -0.3 1,400,597 + -2.4 1,400,597 + -0.5 1,400,597 + -0.9 1,400,657 + SM_b21476 0.17 +0.7 1,400,658 - SM_b21476 0.17 +0.6 1,400,697 + SM_b21476 0.28 +1.0 1,400,698 - SM_b21476 0.28 -1.9 1,400,715 - SM_b21476 0.33 -0.1
Or see this region's nucleotide sequence