Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21466 and SM_b21467 are separated by 245 nucleotides SM_b21467 and SM_b21468 are separated by 207 nucleotides SM_b21468 and SM_b21469 are separated by 96 nucleotides SM_b21469 and SM_b21470 are separated by 109 nucleotides SM_b21470 and SM_b21471 overlap by 23 nucleotides
SM_b21466: SM_b21466 - ABC transporter ATP-binding protein, at 1,393,364 to 1,395,124
_b21466
SM_b21467: SM_b21467 - hypothetical protein, at 1,395,370 to 1,395,714
_b21467
SM_b21468: SM_b21468 - hypothetical protein, at 1,395,922 to 1,397,019
_b21468
SM_b21469: SM_b21469 - hypothetical protein, at 1,397,116 to 1,397,625
_b21469
SM_b21470: SM_b21470 - hypothetical protein, at 1,397,735 to 1,398,016
_b21470
SM_b21471: SM_b21471 - hypothetical protein, at 1,397,994 to 1,398,242
_b21471
Position (kb)
1395
1396
1397
1398 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1394.973 kb on + strand at 1395.006 kb on + strand at 1395.007 kb on - strand at 1395.106 kb on + strand at 1395.252 kb on + strand at 1395.252 kb on + strand at 1395.253 kb on - strand at 1395.291 kb on - strand at 1395.300 kb on + strand at 1395.300 kb on + strand at 1395.301 kb on - strand at 1395.301 kb on - strand at 1395.315 kb on + strand at 1395.316 kb on - strand at 1395.573 kb on - strand, within SM_b21467 at 1395.573 kb on - strand, within SM_b21467 at 1395.584 kb on - strand, within SM_b21467 at 1395.660 kb on - strand, within SM_b21467 at 1395.671 kb on - strand, within SM_b21467 at 1395.718 kb on + strand at 1395.725 kb on - strand at 1396.015 kb on + strand at 1396.015 kb on + strand at 1396.015 kb on + strand at 1396.016 kb on - strand at 1396.016 kb on - strand at 1396.076 kb on + strand, within SM_b21468 at 1396.076 kb on + strand, within SM_b21468 at 1396.076 kb on + strand, within SM_b21468 at 1396.107 kb on - strand, within SM_b21468 at 1396.107 kb on - strand, within SM_b21468 at 1396.107 kb on - strand, within SM_b21468 at 1396.128 kb on - strand, within SM_b21468 at 1396.134 kb on - strand, within SM_b21468 at 1396.184 kb on + strand, within SM_b21468 at 1396.184 kb on + strand, within SM_b21468 at 1396.184 kb on + strand, within SM_b21468 at 1396.184 kb on + strand, within SM_b21468 at 1396.185 kb on - strand, within SM_b21468 at 1396.185 kb on - strand, within SM_b21468 at 1396.185 kb on - strand, within SM_b21468 at 1396.185 kb on - strand, within SM_b21468 at 1396.292 kb on + strand, within SM_b21468 at 1396.397 kb on + strand, within SM_b21468 at 1396.459 kb on + strand, within SM_b21468 at 1396.460 kb on - strand, within SM_b21468 at 1396.568 kb on + strand, within SM_b21468 at 1396.568 kb on + strand, within SM_b21468 at 1396.568 kb on + strand, within SM_b21468 at 1396.569 kb on - strand, within SM_b21468 at 1396.596 kb on + strand, within SM_b21468 at 1396.596 kb on + strand, within SM_b21468 at 1396.848 kb on - strand, within SM_b21468 at 1397.096 kb on + strand at 1397.135 kb on + strand at 1397.135 kb on + strand at 1397.135 kb on + strand at 1397.135 kb on + strand at 1397.135 kb on + strand at 1397.135 kb on + strand at 1397.136 kb on - strand at 1397.139 kb on + strand at 1397.139 kb on + strand at 1397.139 kb on + strand at 1397.139 kb on + strand at 1397.140 kb on - strand at 1397.140 kb on - strand at 1397.140 kb on - strand at 1397.140 kb on - strand at 1397.140 kb on - strand at 1397.140 kb on - strand at 1397.140 kb on - strand at 1397.140 kb on - strand at 1397.142 kb on - strand at 1397.189 kb on + strand, within SM_b21469 at 1397.260 kb on + strand, within SM_b21469 at 1397.265 kb on - strand, within SM_b21469 at 1397.265 kb on - strand, within SM_b21469 at 1397.394 kb on + strand, within SM_b21469 at 1397.395 kb on - strand, within SM_b21469 at 1397.395 kb on - strand, within SM_b21469 at 1397.432 kb on - strand, within SM_b21469 at 1397.553 kb on - strand, within SM_b21469 at 1397.581 kb on - strand at 1397.583 kb on - strand at 1397.604 kb on + strand at 1397.604 kb on + strand at 1397.605 kb on - strand at 1397.623 kb on + strand at 1397.624 kb on - strand at 1397.624 kb on - strand at 1397.738 kb on + strand at 1397.739 kb on - strand at 1397.767 kb on + strand, within SM_b21470 at 1397.861 kb on + strand, within SM_b21470 at 1397.864 kb on + strand, within SM_b21470 at 1397.864 kb on + strand, within SM_b21470 at 1397.865 kb on - strand, within SM_b21470 at 1397.877 kb on + strand, within SM_b21470
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 1,394,973 + -0.4 1,395,006 + +0.9 1,395,007 - +1.9 1,395,106 + +1.1 1,395,252 + +0.6 1,395,252 + +0.2 1,395,253 - -1.0 1,395,291 - -0.3 1,395,300 + +0.6 1,395,300 + +1.4 1,395,301 - -0.7 1,395,301 - +1.2 1,395,315 + +0.3 1,395,316 - -2.4 1,395,573 - SM_b21467 0.59 +0.2 1,395,573 - SM_b21467 0.59 -1.0 1,395,584 - SM_b21467 0.62 -2.0 1,395,660 - SM_b21467 0.84 +0.6 1,395,671 - SM_b21467 0.87 -0.4 1,395,718 + -3.5 1,395,725 - -1.7 1,396,015 + +0.2 1,396,015 + -0.8 1,396,015 + -0.6 1,396,016 - +1.0 1,396,016 - +0.8 1,396,076 + SM_b21468 0.14 -0.4 1,396,076 + SM_b21468 0.14 -0.5 1,396,076 + SM_b21468 0.14 -0.4 1,396,107 - SM_b21468 0.17 -1.5 1,396,107 - SM_b21468 0.17 -1.2 1,396,107 - SM_b21468 0.17 +0.6 1,396,128 - SM_b21468 0.19 +0.4 1,396,134 - SM_b21468 0.19 -1.2 1,396,184 + SM_b21468 0.24 +0.4 1,396,184 + SM_b21468 0.24 +0.0 1,396,184 + SM_b21468 0.24 -0.6 1,396,184 + SM_b21468 0.24 -0.1 1,396,185 - SM_b21468 0.24 +0.1 1,396,185 - SM_b21468 0.24 -0.6 1,396,185 - SM_b21468 0.24 +0.2 1,396,185 - SM_b21468 0.24 -2.1 1,396,292 + SM_b21468 0.34 -0.3 1,396,397 + SM_b21468 0.43 +0.1 1,396,459 + SM_b21468 0.49 -3.6 1,396,460 - SM_b21468 0.49 +0.3 1,396,568 + SM_b21468 0.59 +0.0 1,396,568 + SM_b21468 0.59 -0.4 1,396,568 + SM_b21468 0.59 -1.6 1,396,569 - SM_b21468 0.59 +0.2 1,396,596 + SM_b21468 0.61 +1.6 1,396,596 + SM_b21468 0.61 -0.5 1,396,848 - SM_b21468 0.84 +1.6 1,397,096 + +2.1 1,397,135 + -0.3 1,397,135 + -0.8 1,397,135 + +0.4 1,397,135 + -0.7 1,397,135 + +0.1 1,397,135 + +1.1 1,397,136 - -0.4 1,397,139 + -0.1 1,397,139 + +1.2 1,397,139 + +0.5 1,397,139 + -0.6 1,397,140 - -0.5 1,397,140 - -0.5 1,397,140 - -1.0 1,397,140 - -0.3 1,397,140 - -0.4 1,397,140 - +0.2 1,397,140 - -1.3 1,397,140 - +2.4 1,397,142 - -1.4 1,397,189 + SM_b21469 0.14 +1.4 1,397,260 + SM_b21469 0.28 +2.1 1,397,265 - SM_b21469 0.29 -0.6 1,397,265 - SM_b21469 0.29 +1.0 1,397,394 + SM_b21469 0.55 +0.2 1,397,395 - SM_b21469 0.55 -1.3 1,397,395 - SM_b21469 0.55 +0.5 1,397,432 - SM_b21469 0.62 -1.9 1,397,553 - SM_b21469 0.86 -0.3 1,397,581 - -0.1 1,397,583 - +1.7 1,397,604 + -1.2 1,397,604 + -0.5 1,397,605 - -0.5 1,397,623 + +0.4 1,397,624 - -0.4 1,397,624 - -0.3 1,397,738 + +0.3 1,397,739 - -2.5 1,397,767 + SM_b21470 0.11 +0.6 1,397,861 + SM_b21470 0.45 +0.0 1,397,864 + SM_b21470 0.46 -0.0 1,397,864 + SM_b21470 0.46 -0.8 1,397,865 - SM_b21470 0.46 +2.6 1,397,877 + SM_b21470 0.50 -1.1
Or see this region's nucleotide sequence