Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21440 and SM_b21441 are separated by 551 nucleotides SM_b21441 and SM_b21442 are separated by 12 nucleotides SM_b21442 and SM_b21443 are separated by 51 nucleotides SM_b21443 and SM_b21444 are separated by 17 nucleotides
SM_b21440: SM_b21440 - hypothetical protein, at 1,370,059 to 1,370,493
_b21440
SM_b21441: SM_b21441 - inosine-5'-monophosphate dehydrogenase, at 1,371,045 to 1,371,485
_b21441
SM_b21442: SM_b21442 - hypothetical protein, at 1,371,498 to 1,371,947
_b21442
SM_b21443: SM_b21443 - hypothetical protein, at 1,371,999 to 1,372,313
_b21443
SM_b21444: SM_b21444 - osmotic sensory protein, at 1,372,331 to 1,373,074
_b21444
Position (kb) 1371
1372 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1370.073 kb on + strand at 1370.074 kb on - strand at 1370.074 kb on - strand at 1370.111 kb on + strand, within SM_b21440 at 1370.111 kb on + strand, within SM_b21440 at 1370.245 kb on + strand at 1370.245 kb on + strand, within SM_b21440 at 1370.246 kb on - strand, within SM_b21440 at 1370.246 kb on - strand, within SM_b21440 at 1370.246 kb on - strand, within SM_b21440 at 1370.246 kb on - strand, within SM_b21440 at 1370.246 kb on - strand, within SM_b21440 at 1370.246 kb on - strand, within SM_b21440 at 1370.264 kb on + strand, within SM_b21440 at 1370.265 kb on - strand, within SM_b21440 at 1370.392 kb on + strand, within SM_b21440 at 1370.393 kb on - strand, within SM_b21440 at 1370.394 kb on + strand, within SM_b21440 at 1370.395 kb on - strand, within SM_b21440 at 1370.395 kb on - strand, within SM_b21440 at 1370.491 kb on + strand at 1370.492 kb on - strand at 1370.571 kb on + strand at 1370.571 kb on + strand at 1370.693 kb on - strand at 1370.693 kb on - strand at 1370.859 kb on + strand at 1370.972 kb on - strand at 1370.972 kb on - strand at 1371.040 kb on - strand at 1371.040 kb on - strand at 1371.041 kb on + strand at 1371.305 kb on + strand, within SM_b21441 at 1371.306 kb on - strand, within SM_b21441 at 1371.306 kb on - strand, within SM_b21441 at 1371.477 kb on + strand at 1371.847 kb on - strand, within SM_b21442 at 1371.893 kb on + strand, within SM_b21442 at 1371.894 kb on - strand, within SM_b21442 at 1371.911 kb on + strand at 1371.982 kb on - strand at 1372.002 kb on + strand at 1372.002 kb on + strand at 1372.002 kb on + strand at 1372.002 kb on + strand at 1372.003 kb on - strand at 1372.003 kb on - strand at 1372.003 kb on - strand at 1372.003 kb on - strand at 1372.003 kb on - strand at 1372.003 kb on - strand at 1372.003 kb on - strand at 1372.003 kb on - strand at 1372.134 kb on + strand, within SM_b21443 at 1372.134 kb on + strand, within SM_b21443 at 1372.135 kb on - strand, within SM_b21443 at 1372.358 kb on + strand at 1372.358 kb on + strand at 1372.359 kb on - strand at 1372.424 kb on + strand, within SM_b21444 at 1372.430 kb on + strand, within SM_b21444 at 1372.430 kb on + strand, within SM_b21444 at 1372.431 kb on - strand, within SM_b21444
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 1,370,073 + +1.2 1,370,074 - +0.1 1,370,074 - +0.3 1,370,111 + SM_b21440 0.12 +0.3 1,370,111 + SM_b21440 0.12 +1.3 1,370,245 + -1.4 1,370,245 + SM_b21440 0.43 +0.3 1,370,246 - SM_b21440 0.43 +0.0 1,370,246 - SM_b21440 0.43 +0.8 1,370,246 - SM_b21440 0.43 +1.9 1,370,246 - SM_b21440 0.43 +0.1 1,370,246 - SM_b21440 0.43 -0.2 1,370,246 - SM_b21440 0.43 -0.1 1,370,264 + SM_b21440 0.47 -0.4 1,370,265 - SM_b21440 0.47 -0.7 1,370,392 + SM_b21440 0.77 -0.1 1,370,393 - SM_b21440 0.77 +0.5 1,370,394 + SM_b21440 0.77 +3.2 1,370,395 - SM_b21440 0.77 +0.3 1,370,395 - SM_b21440 0.77 -1.0 1,370,491 + -0.8 1,370,492 - -2.9 1,370,571 + +0.3 1,370,571 + -3.0 1,370,693 - -0.4 1,370,693 - +0.7 1,370,859 + +1.2 1,370,972 - -0.2 1,370,972 - -1.6 1,371,040 - +0.4 1,371,040 - -0.8 1,371,041 + +0.6 1,371,305 + SM_b21441 0.59 +0.9 1,371,306 - SM_b21441 0.59 -1.4 1,371,306 - SM_b21441 0.59 +0.9 1,371,477 + -0.3 1,371,847 - SM_b21442 0.78 +0.4 1,371,893 + SM_b21442 0.88 -0.1 1,371,894 - SM_b21442 0.88 -1.0 1,371,911 + -2.4 1,371,982 - -3.3 1,372,002 + +0.2 1,372,002 + -0.8 1,372,002 + -2.3 1,372,002 + -1.0 1,372,003 - -1.1 1,372,003 - -0.5 1,372,003 - +0.2 1,372,003 - -1.4 1,372,003 - -1.2 1,372,003 - +1.4 1,372,003 - -2.1 1,372,003 - -0.8 1,372,134 + SM_b21443 0.43 -2.0 1,372,134 + SM_b21443 0.43 -0.6 1,372,135 - SM_b21443 0.43 -3.5 1,372,358 + -0.3 1,372,358 + +1.6 1,372,359 - -1.5 1,372,424 + SM_b21444 0.12 +0.8 1,372,430 + SM_b21444 0.13 +0.4 1,372,430 + SM_b21444 0.13 +0.3 1,372,431 - SM_b21444 0.13 -2.1
Or see this region's nucleotide sequence