Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21369 and SM_b21370 overlap by 4 nucleotides SM_b21370 and SM_b21371 are separated by 7 nucleotides SM_b21371 and SM_b21372 are separated by 3 nucleotides
SM_b21369: SM_b21369 - hypothetical protein, at 1,032,568 to 1,033,641
_b21369
SM_b21370: SM_b21370 - cytochrome c oxidase subunit I, at 1,033,638 to 1,036,163
_b21370
SM_b21371: SM_b21371 - hypothetical protein, at 1,036,171 to 1,036,542
_b21371
SM_b21372: SM_b21372 - LacI family transcriptional regulator, at 1,036,546 to 1,037,604
_b21372
Position (kb)
1033
1034
1035
1036
1037 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1032.665 kb on - strand at 1033.146 kb on - strand, within SM_b21369 at 1033.210 kb on + strand at 1033.211 kb on - strand, within SM_b21369 at 1033.348 kb on + strand, within SM_b21369 at 1033.348 kb on + strand, within SM_b21369 at 1033.348 kb on + strand, within SM_b21369 at 1033.348 kb on + strand, within SM_b21369 at 1033.349 kb on - strand, within SM_b21369 at 1033.349 kb on - strand, within SM_b21369 at 1033.349 kb on - strand, within SM_b21369 at 1033.349 kb on - strand, within SM_b21369 at 1033.349 kb on - strand, within SM_b21369 at 1033.350 kb on + strand, within SM_b21369 at 1033.350 kb on + strand, within SM_b21369 at 1033.350 kb on + strand, within SM_b21369 at 1033.350 kb on + strand, within SM_b21369 at 1033.350 kb on + strand, within SM_b21369 at 1033.351 kb on - strand, within SM_b21369 at 1033.351 kb on - strand, within SM_b21369 at 1033.351 kb on - strand, within SM_b21369 at 1033.389 kb on - strand, within SM_b21369 at 1033.389 kb on - strand, within SM_b21369 at 1033.555 kb on + strand at 1033.607 kb on - strand at 1033.745 kb on + strand at 1033.745 kb on + strand at 1033.869 kb on + strand at 1033.870 kb on - strand at 1034.019 kb on + strand, within SM_b21370 at 1034.019 kb on + strand, within SM_b21370 at 1034.019 kb on + strand, within SM_b21370 at 1034.058 kb on + strand, within SM_b21370 at 1034.058 kb on + strand, within SM_b21370 at 1034.091 kb on + strand, within SM_b21370 at 1034.092 kb on - strand, within SM_b21370 at 1034.115 kb on + strand, within SM_b21370 at 1034.116 kb on - strand, within SM_b21370 at 1034.116 kb on - strand, within SM_b21370 at 1034.437 kb on - strand, within SM_b21370 at 1034.437 kb on - strand, within SM_b21370 at 1034.480 kb on - strand, within SM_b21370 at 1034.512 kb on - strand, within SM_b21370 at 1034.768 kb on + strand, within SM_b21370 at 1034.768 kb on + strand, within SM_b21370 at 1034.810 kb on - strand, within SM_b21370 at 1034.820 kb on + strand, within SM_b21370 at 1034.821 kb on - strand, within SM_b21370 at 1034.821 kb on - strand, within SM_b21370 at 1034.821 kb on - strand, within SM_b21370 at 1034.821 kb on - strand, within SM_b21370 at 1034.821 kb on - strand, within SM_b21370 at 1034.844 kb on + strand, within SM_b21370 at 1034.845 kb on - strand, within SM_b21370 at 1034.845 kb on - strand, within SM_b21370 at 1034.889 kb on + strand at 1035.090 kb on + strand, within SM_b21370 at 1035.090 kb on + strand, within SM_b21370 at 1035.090 kb on + strand, within SM_b21370 at 1035.090 kb on + strand, within SM_b21370 at 1035.090 kb on + strand, within SM_b21370 at 1035.091 kb on - strand, within SM_b21370 at 1035.091 kb on - strand, within SM_b21370 at 1035.091 kb on - strand, within SM_b21370 at 1035.214 kb on - strand, within SM_b21370 at 1035.239 kb on + strand, within SM_b21370 at 1035.286 kb on + strand, within SM_b21370 at 1035.287 kb on - strand, within SM_b21370 at 1035.304 kb on - strand, within SM_b21370 at 1035.304 kb on - strand, within SM_b21370 at 1035.304 kb on - strand, within SM_b21370 at 1035.372 kb on + strand, within SM_b21370 at 1035.372 kb on + strand, within SM_b21370 at 1035.373 kb on - strand, within SM_b21370 at 1035.509 kb on - strand, within SM_b21370 at 1035.585 kb on + strand, within SM_b21370 at 1035.585 kb on + strand, within SM_b21370 at 1035.585 kb on + strand, within SM_b21370 at 1035.585 kb on + strand, within SM_b21370 at 1035.585 kb on + strand, within SM_b21370 at 1035.585 kb on + strand, within SM_b21370 at 1035.586 kb on - strand, within SM_b21370 at 1035.586 kb on - strand, within SM_b21370 at 1035.586 kb on - strand, within SM_b21370 at 1035.586 kb on - strand, within SM_b21370 at 1035.586 kb on - strand, within SM_b21370 at 1035.588 kb on - strand, within SM_b21370 at 1035.654 kb on + strand, within SM_b21370 at 1035.654 kb on + strand, within SM_b21370 at 1035.654 kb on + strand, within SM_b21370 at 1035.655 kb on - strand, within SM_b21370 at 1035.663 kb on + strand, within SM_b21370 at 1035.663 kb on + strand, within SM_b21370 at 1035.676 kb on - strand, within SM_b21370 at 1035.676 kb on - strand, within SM_b21370 at 1035.793 kb on + strand, within SM_b21370 at 1035.793 kb on + strand, within SM_b21370 at 1035.793 kb on + strand, within SM_b21370 at 1035.793 kb on + strand, within SM_b21370 at 1035.794 kb on - strand, within SM_b21370 at 1035.794 kb on - strand, within SM_b21370 at 1035.794 kb on - strand, within SM_b21370 at 1035.946 kb on - strand at 1035.960 kb on + strand at 1036.080 kb on + strand at 1036.080 kb on + strand at 1036.081 kb on - strand at 1036.081 kb on - strand at 1036.081 kb on - strand at 1036.092 kb on + strand at 1036.092 kb on + strand at 1036.092 kb on + strand at 1036.098 kb on + strand at 1036.098 kb on + strand at 1036.099 kb on - strand at 1036.264 kb on + strand, within SM_b21371 at 1036.264 kb on + strand, within SM_b21371 at 1036.265 kb on - strand, within SM_b21371 at 1036.265 kb on - strand, within SM_b21371 at 1036.265 kb on - strand, within SM_b21371 at 1036.266 kb on + strand, within SM_b21371 at 1036.267 kb on - strand, within SM_b21371 at 1036.679 kb on + strand, within SM_b21372 at 1036.680 kb on - strand, within SM_b21372 at 1036.680 kb on - strand, within SM_b21372 at 1036.680 kb on - strand, within SM_b21372 at 1036.716 kb on - strand, within SM_b21372 at 1036.925 kb on + strand, within SM_b21372 at 1036.925 kb on + strand, within SM_b21372 at 1036.925 kb on + strand, within SM_b21372 at 1036.925 kb on + strand, within SM_b21372 at 1036.926 kb on - strand, within SM_b21372 at 1036.926 kb on - strand, within SM_b21372 at 1036.926 kb on - strand, within SM_b21372 at 1036.982 kb on + strand, within SM_b21372 at 1036.982 kb on + strand, within SM_b21372 at 1036.982 kb on + strand, within SM_b21372 at 1036.982 kb on + strand, within SM_b21372 at 1036.983 kb on - strand, within SM_b21372 at 1037.033 kb on + strand, within SM_b21372 at 1037.034 kb on - strand, within SM_b21372 at 1037.034 kb on - strand, within SM_b21372 at 1037.034 kb on - strand, within SM_b21372 at 1037.141 kb on + strand, within SM_b21372 at 1037.141 kb on + strand, within SM_b21372 at 1037.141 kb on + strand, within SM_b21372 at 1037.142 kb on - strand, within SM_b21372
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 1,032,665 - -2.3 1,033,146 - SM_b21369 0.54 +0.9 1,033,210 + +1.2 1,033,211 - SM_b21369 0.60 -2.6 1,033,348 + SM_b21369 0.73 +1.2 1,033,348 + SM_b21369 0.73 -0.6 1,033,348 + SM_b21369 0.73 -1.2 1,033,348 + SM_b21369 0.73 +0.8 1,033,349 - SM_b21369 0.73 +0.3 1,033,349 - SM_b21369 0.73 +0.9 1,033,349 - SM_b21369 0.73 -0.2 1,033,349 - SM_b21369 0.73 +1.2 1,033,349 - SM_b21369 0.73 +1.0 1,033,350 + SM_b21369 0.73 -0.4 1,033,350 + SM_b21369 0.73 -0.2 1,033,350 + SM_b21369 0.73 +1.2 1,033,350 + SM_b21369 0.73 +0.0 1,033,350 + SM_b21369 0.73 -0.2 1,033,351 - SM_b21369 0.73 +0.2 1,033,351 - SM_b21369 0.73 -0.2 1,033,351 - SM_b21369 0.73 -1.9 1,033,389 - SM_b21369 0.76 -1.0 1,033,389 - SM_b21369 0.76 -0.2 1,033,555 + +0.5 1,033,607 - -3.0 1,033,745 + -0.9 1,033,745 + -0.9 1,033,869 + -1.7 1,033,870 - -1.8 1,034,019 + SM_b21370 0.15 -0.3 1,034,019 + SM_b21370 0.15 -2.2 1,034,019 + SM_b21370 0.15 +1.2 1,034,058 + SM_b21370 0.17 +0.3 1,034,058 + SM_b21370 0.17 +0.0 1,034,091 + SM_b21370 0.18 +1.2 1,034,092 - SM_b21370 0.18 -0.5 1,034,115 + SM_b21370 0.19 -0.1 1,034,116 - SM_b21370 0.19 +1.2 1,034,116 - SM_b21370 0.19 +0.4 1,034,437 - SM_b21370 0.32 -0.7 1,034,437 - SM_b21370 0.32 +1.3 1,034,480 - SM_b21370 0.33 +1.6 1,034,512 - SM_b21370 0.35 +0.8 1,034,768 + SM_b21370 0.45 +0.5 1,034,768 + SM_b21370 0.45 -0.3 1,034,810 - SM_b21370 0.46 +0.1 1,034,820 + SM_b21370 0.47 -0.7 1,034,821 - SM_b21370 0.47 +0.4 1,034,821 - SM_b21370 0.47 -0.8 1,034,821 - SM_b21370 0.47 +0.0 1,034,821 - SM_b21370 0.47 +0.5 1,034,821 - SM_b21370 0.47 +1.3 1,034,844 + SM_b21370 0.48 -0.5 1,034,845 - SM_b21370 0.48 +0.6 1,034,845 - SM_b21370 0.48 -0.2 1,034,889 + -1.1 1,035,090 + SM_b21370 0.57 -0.0 1,035,090 + SM_b21370 0.57 -0.9 1,035,090 + SM_b21370 0.57 +0.4 1,035,090 + SM_b21370 0.57 -0.6 1,035,090 + SM_b21370 0.57 +0.0 1,035,091 - SM_b21370 0.58 +1.2 1,035,091 - SM_b21370 0.58 -0.5 1,035,091 - SM_b21370 0.58 +1.2 1,035,214 - SM_b21370 0.62 +0.4 1,035,239 + SM_b21370 0.63 +0.2 1,035,286 + SM_b21370 0.65 +0.4 1,035,287 - SM_b21370 0.65 -0.4 1,035,304 - SM_b21370 0.66 -0.3 1,035,304 - SM_b21370 0.66 -1.0 1,035,304 - SM_b21370 0.66 +0.9 1,035,372 + SM_b21370 0.69 -0.6 1,035,372 + SM_b21370 0.69 -0.6 1,035,373 - SM_b21370 0.69 -1.9 1,035,509 - SM_b21370 0.74 -0.6 1,035,585 + SM_b21370 0.77 +0.3 1,035,585 + SM_b21370 0.77 +0.4 1,035,585 + SM_b21370 0.77 +0.7 1,035,585 + SM_b21370 0.77 +1.2 1,035,585 + SM_b21370 0.77 +0.1 1,035,585 + SM_b21370 0.77 +0.2 1,035,586 - SM_b21370 0.77 -1.5 1,035,586 - SM_b21370 0.77 +0.2 1,035,586 - SM_b21370 0.77 +0.3 1,035,586 - SM_b21370 0.77 -0.4 1,035,586 - SM_b21370 0.77 +0.5 1,035,588 - SM_b21370 0.77 -1.1 1,035,654 + SM_b21370 0.80 +0.4 1,035,654 + SM_b21370 0.80 -1.1 1,035,654 + SM_b21370 0.80 +1.1 1,035,655 - SM_b21370 0.80 -0.8 1,035,663 + SM_b21370 0.80 -0.9 1,035,663 + SM_b21370 0.80 +0.8 1,035,676 - SM_b21370 0.81 +2.4 1,035,676 - SM_b21370 0.81 +0.5 1,035,793 + SM_b21370 0.85 +0.2 1,035,793 + SM_b21370 0.85 +2.3 1,035,793 + SM_b21370 0.85 +0.4 1,035,793 + SM_b21370 0.85 +1.3 1,035,794 - SM_b21370 0.85 +1.8 1,035,794 - SM_b21370 0.85 +0.3 1,035,794 - SM_b21370 0.85 -0.8 1,035,946 - -0.1 1,035,960 + +0.1 1,036,080 + +0.0 1,036,080 + -0.3 1,036,081 - -0.9 1,036,081 - +0.1 1,036,081 - -1.0 1,036,092 + -0.5 1,036,092 + -0.1 1,036,092 + +0.6 1,036,098 + +0.1 1,036,098 + +0.3 1,036,099 - +0.1 1,036,264 + SM_b21371 0.25 +0.5 1,036,264 + SM_b21371 0.25 -0.4 1,036,265 - SM_b21371 0.25 -0.8 1,036,265 - SM_b21371 0.25 -0.6 1,036,265 - SM_b21371 0.25 -0.8 1,036,266 + SM_b21371 0.26 +0.3 1,036,267 - SM_b21371 0.26 -0.3 1,036,679 + SM_b21372 0.13 +0.5 1,036,680 - SM_b21372 0.13 +1.2 1,036,680 - SM_b21372 0.13 +0.8 1,036,680 - SM_b21372 0.13 +0.9 1,036,716 - SM_b21372 0.16 -0.7 1,036,925 + SM_b21372 0.36 +1.9 1,036,925 + SM_b21372 0.36 +0.5 1,036,925 + SM_b21372 0.36 -0.3 1,036,925 + SM_b21372 0.36 -1.6 1,036,926 - SM_b21372 0.36 +2.4 1,036,926 - SM_b21372 0.36 -0.4 1,036,926 - SM_b21372 0.36 +1.1 1,036,982 + SM_b21372 0.41 +0.5 1,036,982 + SM_b21372 0.41 +2.5 1,036,982 + SM_b21372 0.41 -0.3 1,036,982 + SM_b21372 0.41 +3.5 1,036,983 - SM_b21372 0.41 +1.2 1,037,033 + SM_b21372 0.46 -0.8 1,037,034 - SM_b21372 0.46 +1.6 1,037,034 - SM_b21372 0.46 -0.3 1,037,034 - SM_b21372 0.46 +0.4 1,037,141 + SM_b21372 0.56 +0.1 1,037,141 + SM_b21372 0.56 +0.1 1,037,141 + SM_b21372 0.56 +1.2 1,037,142 - SM_b21372 0.56 -2.0
Or see this region's nucleotide sequence