Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21289 and SM_b21290 overlap by 11 nucleotides SM_b21290 and SM_b21291 are separated by 11 nucleotides SM_b21291 and SM_b21292 are separated by 149 nucleotides
SM_b21289: SM_b21289 - protein, may interact with ubiquitin, at 865,575 to 866,078
_b21289
SM_b21290: SM_b21290 - NADPH quinone oxidoreductase, at 866,068 to 867,048
_b21290
SM_b21291: SM_b21291 - LysR family transcriptional regulator, at 867,060 to 868,007
_b21291
SM_b21292: SM_b21292 - membrane protein, at 868,157 to 869,395
_b21292
Position (kb) 867
868
869 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 866.067 kb on + strand at 866.067 kb on + strand at 866.068 kb on - strand at 866.130 kb on + strand at 866.189 kb on - strand, within SM_b21290 at 866.189 kb on - strand, within SM_b21290 at 866.277 kb on - strand, within SM_b21290 at 866.363 kb on - strand, within SM_b21290 at 866.371 kb on + strand, within SM_b21290 at 866.372 kb on - strand, within SM_b21290 at 866.375 kb on + strand, within SM_b21290 at 866.375 kb on + strand, within SM_b21290 at 866.376 kb on - strand, within SM_b21290 at 866.399 kb on + strand, within SM_b21290 at 866.650 kb on + strand, within SM_b21290 at 866.651 kb on - strand, within SM_b21290 at 866.651 kb on - strand, within SM_b21290 at 866.651 kb on - strand, within SM_b21290 at 866.651 kb on - strand, within SM_b21290 at 866.718 kb on - strand, within SM_b21290 at 866.825 kb on + strand, within SM_b21290 at 866.870 kb on + strand, within SM_b21290 at 867.028 kb on - strand at 867.257 kb on + strand, within SM_b21291 at 867.258 kb on - strand, within SM_b21291 at 867.400 kb on + strand, within SM_b21291 at 867.400 kb on + strand, within SM_b21291 at 867.400 kb on + strand, within SM_b21291 at 867.401 kb on - strand, within SM_b21291 at 867.403 kb on + strand, within SM_b21291 at 867.421 kb on + strand, within SM_b21291 at 867.568 kb on - strand, within SM_b21291 at 867.617 kb on + strand, within SM_b21291 at 867.618 kb on - strand, within SM_b21291 at 867.618 kb on - strand, within SM_b21291 at 867.675 kb on + strand, within SM_b21291 at 867.812 kb on - strand, within SM_b21291 at 867.878 kb on + strand, within SM_b21291 at 868.038 kb on + strand at 868.126 kb on + strand at 868.126 kb on + strand at 868.127 kb on - strand at 868.160 kb on + strand at 868.160 kb on + strand at 868.160 kb on + strand at 868.161 kb on - strand at 868.161 kb on - strand at 868.161 kb on - strand at 868.343 kb on + strand, within SM_b21292 at 868.343 kb on + strand, within SM_b21292 at 868.343 kb on + strand, within SM_b21292 at 868.343 kb on + strand, within SM_b21292 at 868.344 kb on - strand, within SM_b21292 at 868.344 kb on - strand, within SM_b21292 at 868.344 kb on - strand, within SM_b21292 at 868.415 kb on + strand, within SM_b21292 at 868.458 kb on - strand, within SM_b21292 at 868.458 kb on - strand, within SM_b21292 at 868.478 kb on + strand, within SM_b21292 at 868.478 kb on + strand, within SM_b21292 at 868.479 kb on - strand, within SM_b21292 at 868.603 kb on + strand, within SM_b21292 at 868.625 kb on + strand, within SM_b21292 at 868.626 kb on - strand, within SM_b21292 at 868.626 kb on - strand, within SM_b21292 at 868.685 kb on + strand, within SM_b21292 at 868.845 kb on - strand, within SM_b21292 at 868.910 kb on + strand, within SM_b21292 at 868.911 kb on - strand, within SM_b21292 at 868.911 kb on - strand, within SM_b21292 at 868.912 kb on + strand, within SM_b21292 at 868.913 kb on - strand, within SM_b21292
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 866,067 + -0.7 866,067 + +0.4 866,068 - -1.2 866,130 + +1.1 866,189 - SM_b21290 0.12 -0.4 866,189 - SM_b21290 0.12 +0.8 866,277 - SM_b21290 0.21 +0.6 866,363 - SM_b21290 0.30 +0.7 866,371 + SM_b21290 0.31 -1.0 866,372 - SM_b21290 0.31 +1.5 866,375 + SM_b21290 0.31 -0.2 866,375 + SM_b21290 0.31 +0.8 866,376 - SM_b21290 0.31 -0.6 866,399 + SM_b21290 0.34 -0.5 866,650 + SM_b21290 0.59 -0.3 866,651 - SM_b21290 0.59 +0.3 866,651 - SM_b21290 0.59 +0.4 866,651 - SM_b21290 0.59 +1.7 866,651 - SM_b21290 0.59 -2.1 866,718 - SM_b21290 0.66 -1.2 866,825 + SM_b21290 0.77 +0.3 866,870 + SM_b21290 0.82 -0.8 867,028 - -2.4 867,257 + SM_b21291 0.21 -0.6 867,258 - SM_b21291 0.21 +0.0 867,400 + SM_b21291 0.36 +0.1 867,400 + SM_b21291 0.36 +0.8 867,400 + SM_b21291 0.36 -0.1 867,401 - SM_b21291 0.36 -0.6 867,403 + SM_b21291 0.36 -1.2 867,421 + SM_b21291 0.38 -0.3 867,568 - SM_b21291 0.54 +0.5 867,617 + SM_b21291 0.59 -1.6 867,618 - SM_b21291 0.59 -0.7 867,618 - SM_b21291 0.59 -0.5 867,675 + SM_b21291 0.65 -1.8 867,812 - SM_b21291 0.79 -0.9 867,878 + SM_b21291 0.86 -1.1 868,038 + +0.6 868,126 + +3.0 868,126 + -1.1 868,127 - -1.9 868,160 + +1.0 868,160 + -0.8 868,160 + +0.4 868,161 - -3.0 868,161 - +1.6 868,161 - -0.7 868,343 + SM_b21292 0.15 -0.6 868,343 + SM_b21292 0.15 +1.1 868,343 + SM_b21292 0.15 -0.1 868,343 + SM_b21292 0.15 -0.4 868,344 - SM_b21292 0.15 -1.1 868,344 - SM_b21292 0.15 +0.3 868,344 - SM_b21292 0.15 -0.6 868,415 + SM_b21292 0.21 +0.1 868,458 - SM_b21292 0.24 +0.3 868,458 - SM_b21292 0.24 +0.9 868,478 + SM_b21292 0.26 -0.4 868,478 + SM_b21292 0.26 +0.6 868,479 - SM_b21292 0.26 +1.9 868,603 + SM_b21292 0.36 +0.3 868,625 + SM_b21292 0.38 +0.7 868,626 - SM_b21292 0.38 -0.2 868,626 - SM_b21292 0.38 -1.7 868,685 + SM_b21292 0.43 +1.5 868,845 - SM_b21292 0.56 -0.1 868,910 + SM_b21292 0.61 -0.1 868,911 - SM_b21292 0.61 +0.7 868,911 - SM_b21292 0.61 +1.0 868,912 + SM_b21292 0.61 -0.1 868,913 - SM_b21292 0.61 +4.3
Or see this region's nucleotide sequence