Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21245 and SM_b21246 are separated by 62 nucleotides SM_b21246 and SM_b21247 are separated by 40 nucleotides SM_b21247 and SM_b21248 are separated by 68 nucleotides
SM_b21245: SM_b21245 - OMA family outer membrane protein, at 813,621 to 814,871
_b21245
SM_b21246: SM_b21246 - UDP-phosphate galactose phosphotransferase, at 814,934 to 815,626
_b21246
SM_b21247: SM_b21247 - hypothetical protein, at 815,667 to 816,353
_b21247
SM_b21248: SM_b21248 - aminotransferase, at 816,422 to 817,612
_b21248
Position (kb) 814
815
816 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 814.023 kb on + strand, within SM_b21245 at 814.023 kb on + strand, within SM_b21245 at 814.024 kb on - strand, within SM_b21245 at 814.170 kb on + strand, within SM_b21245 at 814.171 kb on - strand, within SM_b21245 at 814.171 kb on - strand, within SM_b21245 at 814.248 kb on + strand, within SM_b21245 at 814.248 kb on + strand, within SM_b21245 at 814.249 kb on - strand, within SM_b21245 at 814.249 kb on - strand, within SM_b21245 at 814.249 kb on - strand, within SM_b21245 at 814.279 kb on + strand, within SM_b21245 at 814.280 kb on - strand, within SM_b21245 at 814.354 kb on + strand, within SM_b21245 at 814.381 kb on + strand, within SM_b21245 at 814.382 kb on - strand, within SM_b21245 at 814.446 kb on - strand, within SM_b21245 at 814.627 kb on + strand, within SM_b21245 at 814.627 kb on + strand, within SM_b21245 at 814.628 kb on - strand, within SM_b21245 at 814.702 kb on + strand, within SM_b21245 at 814.703 kb on - strand, within SM_b21245 at 814.703 kb on - strand at 814.709 kb on + strand, within SM_b21245 at 814.709 kb on + strand, within SM_b21245 at 814.710 kb on - strand, within SM_b21245 at 814.756 kb on - strand at 814.761 kb on + strand at 814.761 kb on + strand at 814.761 kb on + strand at 814.762 kb on - strand at 814.762 kb on - strand at 814.762 kb on - strand at 814.804 kb on + strand at 814.804 kb on + strand at 814.869 kb on + strand at 814.869 kb on + strand at 814.869 kb on + strand at 814.870 kb on - strand at 814.870 kb on - strand at 814.904 kb on + strand at 814.904 kb on + strand at 814.905 kb on - strand at 814.928 kb on - strand at 814.928 kb on - strand at 814.945 kb on + strand at 814.945 kb on + strand at 814.995 kb on - strand at 815.149 kb on + strand, within SM_b21246 at 815.310 kb on + strand, within SM_b21246 at 815.310 kb on + strand, within SM_b21246 at 815.311 kb on - strand, within SM_b21246 at 815.311 kb on - strand, within SM_b21246 at 815.358 kb on + strand, within SM_b21246 at 815.409 kb on + strand, within SM_b21246 at 815.473 kb on + strand, within SM_b21246 at 815.473 kb on + strand, within SM_b21246 at 815.473 kb on + strand, within SM_b21246 at 815.474 kb on - strand, within SM_b21246 at 815.474 kb on - strand, within SM_b21246 at 815.474 kb on - strand, within SM_b21246 at 815.683 kb on + strand at 815.684 kb on - strand at 815.897 kb on - strand, within SM_b21247 at 816.106 kb on - strand, within SM_b21247 at 816.141 kb on + strand, within SM_b21247 at 816.141 kb on + strand, within SM_b21247 at 816.142 kb on - strand, within SM_b21247 at 816.142 kb on - strand, within SM_b21247 at 816.142 kb on - strand, within SM_b21247 at 816.142 kb on - strand, within SM_b21247 at 816.179 kb on + strand, within SM_b21247 at 816.351 kb on + strand at 816.352 kb on - strand at 816.386 kb on + strand at 816.387 kb on - strand at 816.387 kb on - strand at 816.401 kb on + strand at 816.440 kb on + strand at 816.536 kb on + strand at 816.536 kb on + strand at 816.536 kb on + strand at 816.537 kb on - strand at 816.537 kb on - strand at 816.537 kb on - strand at 816.537 kb on - strand at 816.537 kb on - strand at 816.555 kb on + strand, within SM_b21248
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 814,023 + SM_b21245 0.32 -3.3 814,023 + SM_b21245 0.32 +0.8 814,024 - SM_b21245 0.32 -2.3 814,170 + SM_b21245 0.44 -0.0 814,171 - SM_b21245 0.44 +3.9 814,171 - SM_b21245 0.44 +1.7 814,248 + SM_b21245 0.50 -1.9 814,248 + SM_b21245 0.50 -0.4 814,249 - SM_b21245 0.50 -1.7 814,249 - SM_b21245 0.50 -0.9 814,249 - SM_b21245 0.50 -3.3 814,279 + SM_b21245 0.53 -0.7 814,280 - SM_b21245 0.53 +0.4 814,354 + SM_b21245 0.59 -0.6 814,381 + SM_b21245 0.61 -0.3 814,382 - SM_b21245 0.61 -2.4 814,446 - SM_b21245 0.66 -0.5 814,627 + SM_b21245 0.80 +0.4 814,627 + SM_b21245 0.80 +0.1 814,628 - SM_b21245 0.80 +0.4 814,702 + SM_b21245 0.86 +0.3 814,703 - SM_b21245 0.86 -0.0 814,703 - +0.1 814,709 + SM_b21245 0.87 -1.3 814,709 + SM_b21245 0.87 +1.9 814,710 - SM_b21245 0.87 -1.3 814,756 - -0.6 814,761 + -0.4 814,761 + -0.3 814,761 + +0.1 814,762 - -3.4 814,762 - -0.1 814,762 - -1.3 814,804 + -0.1 814,804 + +0.9 814,869 + -0.2 814,869 + -0.8 814,869 + +0.6 814,870 - -0.4 814,870 - +0.3 814,904 + +0.6 814,904 + -1.1 814,905 - +0.2 814,928 - -1.0 814,928 - +1.7 814,945 + +0.9 814,945 + +0.4 814,995 - +0.4 815,149 + SM_b21246 0.31 +0.3 815,310 + SM_b21246 0.54 -0.0 815,310 + SM_b21246 0.54 +1.1 815,311 - SM_b21246 0.54 -0.4 815,311 - SM_b21246 0.54 +0.8 815,358 + SM_b21246 0.61 +1.1 815,409 + SM_b21246 0.69 -1.9 815,473 + SM_b21246 0.78 +1.6 815,473 + SM_b21246 0.78 -1.0 815,473 + SM_b21246 0.78 +1.4 815,474 - SM_b21246 0.78 +0.6 815,474 - SM_b21246 0.78 +0.1 815,474 - SM_b21246 0.78 +0.6 815,683 + -0.0 815,684 - +0.4 815,897 - SM_b21247 0.33 -0.4 816,106 - SM_b21247 0.64 +0.1 816,141 + SM_b21247 0.69 -0.5 816,141 + SM_b21247 0.69 +0.4 816,142 - SM_b21247 0.69 -0.7 816,142 - SM_b21247 0.69 -0.1 816,142 - SM_b21247 0.69 -1.4 816,142 - SM_b21247 0.69 +0.9 816,179 + SM_b21247 0.75 -2.0 816,351 + +0.0 816,352 - -0.4 816,386 + +0.1 816,387 - -2.0 816,387 - -1.3 816,401 + +0.3 816,440 + -0.3 816,536 + +2.1 816,536 + +1.9 816,536 + +1.3 816,537 - -1.9 816,537 - -1.1 816,537 - -0.3 816,537 - +0.1 816,537 - +0.6 816,555 + SM_b21248 0.11 -0.8
Or see this region's nucleotide sequence