Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21094 and SM_b21095 overlap by 4 nucleotides SM_b21095 and SM_b21096 are separated by 8 nucleotides SM_b21096 and SM_b21097 are separated by 49 nucleotides
SM_b21094: SM_b21094 - argininosuccinate lyase, at 736,510 to 737,976
_b21094
SM_b21095: SM_b21095 - amino acid ABC transporter permease, at 737,973 to 738,845
_b21095
SM_b21096: SM_b21096 - amino acid transporter ABC transporter ATP-binding protein, at 738,854 to 739,624
_b21096
SM_b21097: SM_b21097 - amino acid ABC transporter substrate-binding protein, at 739,674 to 740,516
_b21097
Position (kb) 737
738
739 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 736.980 kb on + strand, within SM_b21094 at 736.981 kb on - strand, within SM_b21094 at 737.240 kb on + strand, within SM_b21094 at 737.240 kb on + strand, within SM_b21094 at 737.240 kb on + strand, within SM_b21094 at 737.240 kb on + strand, within SM_b21094 at 737.240 kb on + strand, within SM_b21094 at 737.240 kb on + strand, within SM_b21094 at 737.241 kb on - strand, within SM_b21094 at 737.301 kb on + strand, within SM_b21094 at 737.301 kb on + strand, within SM_b21094 at 737.302 kb on - strand, within SM_b21094 at 737.336 kb on - strand, within SM_b21094 at 737.468 kb on - strand, within SM_b21094 at 737.481 kb on - strand, within SM_b21094 at 737.680 kb on - strand, within SM_b21094 at 738.015 kb on + strand at 738.053 kb on + strand at 738.141 kb on + strand, within SM_b21095 at 738.141 kb on + strand, within SM_b21095 at 738.142 kb on - strand, within SM_b21095 at 738.142 kb on - strand, within SM_b21095 at 738.186 kb on + strand, within SM_b21095 at 738.187 kb on - strand, within SM_b21095 at 738.187 kb on - strand, within SM_b21095 at 738.300 kb on + strand, within SM_b21095 at 738.301 kb on - strand, within SM_b21095 at 738.302 kb on + strand, within SM_b21095 at 738.302 kb on + strand, within SM_b21095 at 738.303 kb on - strand, within SM_b21095 at 738.303 kb on - strand, within SM_b21095 at 738.303 kb on - strand, within SM_b21095 at 738.303 kb on - strand, within SM_b21095 at 738.303 kb on - strand, within SM_b21095 at 738.303 kb on - strand at 738.473 kb on + strand, within SM_b21095 at 738.473 kb on + strand, within SM_b21095 at 738.473 kb on + strand, within SM_b21095 at 738.474 kb on - strand, within SM_b21095 at 738.522 kb on + strand, within SM_b21095 at 738.679 kb on + strand, within SM_b21095 at 738.702 kb on + strand, within SM_b21095 at 738.702 kb on + strand, within SM_b21095 at 738.702 kb on + strand, within SM_b21095 at 738.702 kb on + strand, within SM_b21095 at 738.703 kb on - strand, within SM_b21095 at 738.703 kb on - strand, within SM_b21095 at 738.792 kb on + strand at 738.793 kb on - strand at 738.793 kb on - strand at 738.793 kb on - strand at 738.794 kb on + strand at 738.865 kb on + strand at 738.866 kb on - strand at 738.866 kb on - strand at 738.899 kb on + strand at 738.900 kb on - strand at 739.511 kb on - strand, within SM_b21096 at 739.807 kb on - strand, within SM_b21097 at 739.821 kb on + strand, within SM_b21097 at 739.822 kb on - strand, within SM_b21097
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 736,980 + SM_b21094 0.32 -0.4 736,981 - SM_b21094 0.32 +2.5 737,240 + SM_b21094 0.50 +0.6 737,240 + SM_b21094 0.50 +1.7 737,240 + SM_b21094 0.50 +0.3 737,240 + SM_b21094 0.50 +1.7 737,240 + SM_b21094 0.50 -0.3 737,240 + SM_b21094 0.50 -0.2 737,241 - SM_b21094 0.50 -3.5 737,301 + SM_b21094 0.54 +0.9 737,301 + SM_b21094 0.54 -0.1 737,302 - SM_b21094 0.54 -1.7 737,336 - SM_b21094 0.56 +0.7 737,468 - SM_b21094 0.65 -1.9 737,481 - SM_b21094 0.66 -0.5 737,680 - SM_b21094 0.80 +0.4 738,015 + -1.3 738,053 + +0.0 738,141 + SM_b21095 0.19 -0.4 738,141 + SM_b21095 0.19 -3.0 738,142 - SM_b21095 0.19 -0.2 738,142 - SM_b21095 0.19 +0.0 738,186 + SM_b21095 0.24 -0.4 738,187 - SM_b21095 0.25 -0.1 738,187 - SM_b21095 0.25 +1.1 738,300 + SM_b21095 0.37 +0.3 738,301 - SM_b21095 0.38 +0.3 738,302 + SM_b21095 0.38 +1.6 738,302 + SM_b21095 0.38 -1.9 738,303 - SM_b21095 0.38 -0.4 738,303 - SM_b21095 0.38 -1.6 738,303 - SM_b21095 0.38 -1.3 738,303 - SM_b21095 0.38 -0.0 738,303 - SM_b21095 0.38 -3.0 738,303 - +1.1 738,473 + SM_b21095 0.57 -0.0 738,473 + SM_b21095 0.57 -1.4 738,473 + SM_b21095 0.57 -2.8 738,474 - SM_b21095 0.57 -1.1 738,522 + SM_b21095 0.63 +0.9 738,679 + SM_b21095 0.81 -0.1 738,702 + SM_b21095 0.84 +0.1 738,702 + SM_b21095 0.84 +0.5 738,702 + SM_b21095 0.84 -0.5 738,702 + SM_b21095 0.84 -0.3 738,703 - SM_b21095 0.84 -1.2 738,703 - SM_b21095 0.84 +0.2 738,792 + -0.4 738,793 - +1.8 738,793 - -0.0 738,793 - +0.2 738,794 + -0.8 738,865 + -0.2 738,866 - -0.9 738,866 - +1.3 738,899 + -0.7 738,900 - +0.7 739,511 - SM_b21096 0.85 +0.1 739,807 - SM_b21097 0.16 +0.0 739,821 + SM_b21097 0.17 +0.3 739,822 - SM_b21097 0.18 -0.2
Or see this region's nucleotide sequence