Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21079 and SM_b21080 are separated by 300 nucleotides SM_b21080 and SM_b21081 are separated by 36 nucleotides
SM_b21079: SM_b21079 - transcriptional regulator, at 716,513 to 717,244
_b21079
SM_b21080: SM_b21080 - response regulator protein, at 717,545 to 718,369
_b21080
SM_b21081: SM_b21081 - phosphoglucomutase phosphomannomutase, at 718,406 to 719,953
_b21081
Position (kb) 717
718
719 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 716.582 kb on - strand at 716.587 kb on + strand, within SM_b21079 at 716.588 kb on - strand, within SM_b21079 at 716.588 kb on - strand, within SM_b21079 at 716.588 kb on - strand, within SM_b21079 at 716.588 kb on - strand, within SM_b21079 at 716.627 kb on + strand, within SM_b21079 at 716.648 kb on - strand, within SM_b21079 at 716.769 kb on + strand, within SM_b21079 at 716.769 kb on + strand, within SM_b21079 at 716.769 kb on + strand, within SM_b21079 at 716.832 kb on + strand, within SM_b21079 at 716.832 kb on + strand, within SM_b21079 at 717.012 kb on + strand, within SM_b21079 at 717.013 kb on - strand, within SM_b21079 at 717.013 kb on - strand, within SM_b21079 at 717.065 kb on + strand, within SM_b21079 at 717.065 kb on + strand, within SM_b21079 at 717.066 kb on - strand, within SM_b21079 at 717.140 kb on + strand at 717.369 kb on - strand at 717.369 kb on - strand at 717.543 kb on + strand at 717.562 kb on + strand at 717.613 kb on + strand at 717.614 kb on - strand at 717.643 kb on + strand at 717.643 kb on + strand, within SM_b21080 at 717.643 kb on + strand, within SM_b21080 at 717.646 kb on + strand, within SM_b21080 at 717.646 kb on + strand, within SM_b21080 at 717.658 kb on + strand, within SM_b21080 at 717.658 kb on + strand, within SM_b21080 at 717.659 kb on - strand, within SM_b21080 at 717.748 kb on + strand, within SM_b21080 at 717.765 kb on + strand, within SM_b21080 at 717.766 kb on - strand, within SM_b21080 at 717.986 kb on + strand, within SM_b21080 at 717.986 kb on + strand, within SM_b21080 at 717.986 kb on + strand, within SM_b21080 at 717.987 kb on - strand, within SM_b21080 at 717.987 kb on - strand, within SM_b21080 at 717.987 kb on - strand, within SM_b21080 at 717.987 kb on - strand, within SM_b21080 at 717.988 kb on + strand, within SM_b21080 at 717.988 kb on + strand, within SM_b21080 at 717.988 kb on + strand, within SM_b21080 at 717.989 kb on - strand, within SM_b21080 at 718.053 kb on + strand, within SM_b21080 at 718.053 kb on + strand, within SM_b21080 at 718.123 kb on + strand, within SM_b21080 at 718.124 kb on - strand, within SM_b21080 at 718.203 kb on - strand, within SM_b21080 at 718.231 kb on - strand, within SM_b21080 at 718.292 kb on + strand at 718.292 kb on + strand at 718.293 kb on - strand at 718.293 kb on - strand at 718.293 kb on - strand at 718.293 kb on - strand at 718.306 kb on + strand at 718.368 kb on - strand at 718.474 kb on + strand at 718.475 kb on - strand at 718.478 kb on + strand at 718.520 kb on + strand at 718.520 kb on + strand at 718.521 kb on - strand at 718.573 kb on + strand, within SM_b21081 at 718.574 kb on - strand, within SM_b21081 at 718.673 kb on + strand, within SM_b21081 at 718.674 kb on - strand, within SM_b21081 at 718.766 kb on + strand, within SM_b21081 at 718.949 kb on + strand, within SM_b21081 at 718.949 kb on + strand, within SM_b21081 at 718.979 kb on + strand, within SM_b21081 at 719.142 kb on - strand, within SM_b21081 at 719.142 kb on - strand, within SM_b21081 at 719.143 kb on + strand, within SM_b21081 at 719.144 kb on - strand, within SM_b21081 at 719.314 kb on + strand, within SM_b21081
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 716,582 - +0.3 716,587 + SM_b21079 0.10 +0.3 716,588 - SM_b21079 0.10 -2.1 716,588 - SM_b21079 0.10 +0.5 716,588 - SM_b21079 0.10 -1.2 716,588 - SM_b21079 0.10 -2.7 716,627 + SM_b21079 0.16 -1.2 716,648 - SM_b21079 0.18 -0.9 716,769 + SM_b21079 0.35 +0.5 716,769 + SM_b21079 0.35 +0.3 716,769 + SM_b21079 0.35 -0.4 716,832 + SM_b21079 0.44 +0.1 716,832 + SM_b21079 0.44 +2.0 717,012 + SM_b21079 0.68 -0.2 717,013 - SM_b21079 0.68 -1.1 717,013 - SM_b21079 0.68 -2.6 717,065 + SM_b21079 0.75 -1.8 717,065 + SM_b21079 0.75 -1.7 717,066 - SM_b21079 0.76 +0.1 717,140 + +1.1 717,369 - +0.8 717,369 - -0.5 717,543 + -2.5 717,562 + +0.1 717,613 + -0.9 717,614 - -0.1 717,643 + -1.2 717,643 + SM_b21080 0.12 -1.9 717,643 + SM_b21080 0.12 -2.4 717,646 + SM_b21080 0.12 -1.8 717,646 + SM_b21080 0.12 +0.4 717,658 + SM_b21080 0.14 +0.9 717,658 + SM_b21080 0.14 -0.8 717,659 - SM_b21080 0.14 -1.2 717,748 + SM_b21080 0.25 +0.0 717,765 + SM_b21080 0.27 -0.4 717,766 - SM_b21080 0.27 +1.6 717,986 + SM_b21080 0.53 -0.3 717,986 + SM_b21080 0.53 -0.9 717,986 + SM_b21080 0.53 +0.3 717,987 - SM_b21080 0.54 +0.1 717,987 - SM_b21080 0.54 +1.4 717,987 - SM_b21080 0.54 -0.2 717,987 - SM_b21080 0.54 +0.1 717,988 + SM_b21080 0.54 -0.9 717,988 + SM_b21080 0.54 -0.7 717,988 + SM_b21080 0.54 +1.3 717,989 - SM_b21080 0.54 +1.3 718,053 + SM_b21080 0.62 -0.5 718,053 + SM_b21080 0.62 -0.9 718,123 + SM_b21080 0.70 -0.7 718,124 - SM_b21080 0.70 +0.4 718,203 - SM_b21080 0.80 +1.1 718,231 - SM_b21080 0.83 +1.3 718,292 + +0.4 718,292 + -0.1 718,293 - -0.5 718,293 - +0.2 718,293 - +0.1 718,293 - +0.8 718,306 + -0.4 718,368 - +0.6 718,474 + +0.8 718,475 - +0.6 718,478 + -1.2 718,520 + -0.5 718,520 + -1.6 718,521 - -0.2 718,573 + SM_b21081 0.11 -0.5 718,574 - SM_b21081 0.11 -0.3 718,673 + SM_b21081 0.17 +0.3 718,674 - SM_b21081 0.17 -1.6 718,766 + SM_b21081 0.23 -0.9 718,949 + SM_b21081 0.35 -1.3 718,949 + SM_b21081 0.35 +0.8 718,979 + SM_b21081 0.37 -1.6 719,142 - SM_b21081 0.48 +0.1 719,142 - SM_b21081 0.48 -3.0 719,143 + SM_b21081 0.48 +0.3 719,144 - SM_b21081 0.48 -1.3 719,314 + SM_b21081 0.59 -3.6
Or see this region's nucleotide sequence