Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21062 and SM_b21063 are separated by 58 nucleotides SM_b21063 and SM_b21064 overlap by 4 nucleotides SM_b21064 and SM_b21065 are separated by 15 nucleotides
SM_b21062: SM_b21062 - NDP-hexose methyltransferase, at 695,813 to 697,012
_b21062
SM_b21063: SM_b21063 - nucleotide-binding protein, at 697,071 to 698,642
_b21063
SM_b21064: SM_b21064 - hypothetical protein, at 698,639 to 699,172
_b21064
SM_b21065: SM_b21065 - hypothetical protein, at 699,188 to 700,165
_b21065
Position (kb) 697
698
699 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 696.139 kb on + strand, within SM_b21062 at 696.139 kb on + strand, within SM_b21062 at 696.140 kb on - strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.361 kb on - strand, within SM_b21062 at 696.433 kb on - strand, within SM_b21062 at 696.437 kb on + strand, within SM_b21062 at 696.437 kb on + strand, within SM_b21062 at 696.461 kb on + strand, within SM_b21062 at 696.461 kb on + strand, within SM_b21062 at 696.497 kb on + strand, within SM_b21062 at 696.513 kb on - strand, within SM_b21062 at 696.596 kb on + strand, within SM_b21062 at 696.597 kb on - strand, within SM_b21062 at 696.845 kb on + strand, within SM_b21062 at 696.846 kb on - strand, within SM_b21062 at 696.948 kb on - strand at 696.948 kb on - strand at 697.171 kb on + strand at 697.172 kb on - strand at 697.172 kb on - strand at 697.188 kb on - strand at 697.188 kb on - strand at 697.199 kb on + strand at 697.232 kb on + strand, within SM_b21063 at 697.300 kb on - strand, within SM_b21063 at 697.420 kb on + strand, within SM_b21063 at 697.529 kb on + strand, within SM_b21063 at 697.534 kb on - strand, within SM_b21063 at 697.534 kb on - strand, within SM_b21063 at 697.534 kb on - strand, within SM_b21063 at 697.554 kb on + strand, within SM_b21063 at 697.578 kb on - strand, within SM_b21063 at 697.719 kb on + strand, within SM_b21063 at 697.720 kb on - strand, within SM_b21063 at 697.722 kb on + strand, within SM_b21063 at 697.722 kb on + strand, within SM_b21063 at 697.755 kb on + strand, within SM_b21063 at 697.755 kb on + strand, within SM_b21063 at 697.756 kb on - strand, within SM_b21063 at 697.758 kb on + strand, within SM_b21063 at 697.851 kb on + strand, within SM_b21063 at 697.873 kb on + strand, within SM_b21063 at 697.918 kb on + strand, within SM_b21063 at 697.918 kb on + strand, within SM_b21063 at 697.919 kb on - strand, within SM_b21063 at 697.919 kb on - strand, within SM_b21063 at 698.156 kb on + strand, within SM_b21063 at 698.157 kb on - strand, within SM_b21063 at 698.340 kb on + strand, within SM_b21063 at 698.358 kb on + strand, within SM_b21063 at 698.359 kb on - strand, within SM_b21063 at 698.359 kb on - strand, within SM_b21063 at 698.411 kb on + strand, within SM_b21063 at 698.412 kb on - strand, within SM_b21063 at 698.412 kb on - strand at 698.425 kb on + strand, within SM_b21063 at 698.425 kb on + strand, within SM_b21063 at 698.714 kb on + strand, within SM_b21064 at 698.761 kb on + strand, within SM_b21064 at 698.761 kb on + strand, within SM_b21064 at 698.765 kb on - strand, within SM_b21064 at 698.817 kb on + strand, within SM_b21064 at 698.840 kb on + strand, within SM_b21064 at 698.840 kb on + strand, within SM_b21064 at 698.841 kb on - strand, within SM_b21064 at 698.858 kb on + strand, within SM_b21064 at 698.874 kb on - strand, within SM_b21064 at 698.874 kb on - strand, within SM_b21064 at 699.280 kb on + strand at 699.281 kb on - strand at 699.306 kb on + strand, within SM_b21065 at 699.307 kb on - strand, within SM_b21065 at 699.307 kb on - strand, within SM_b21065 at 699.307 kb on - strand, within SM_b21065 at 699.351 kb on - strand, within SM_b21065 at 699.372 kb on + strand, within SM_b21065 at 699.373 kb on - strand, within SM_b21065 at 699.415 kb on - strand, within SM_b21065 at 699.586 kb on + strand, within SM_b21065 at 699.636 kb on - strand, within SM_b21065 at 699.636 kb on - strand, within SM_b21065
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 696,139 + SM_b21062 0.27 +0.2 696,139 + SM_b21062 0.27 +1.3 696,140 - SM_b21062 0.27 -0.6 696,143 + SM_b21062 0.28 -2.4 696,143 + SM_b21062 0.28 +0.6 696,143 + SM_b21062 0.28 -1.3 696,143 + SM_b21062 0.28 +1.8 696,143 + SM_b21062 0.28 -0.5 696,143 + SM_b21062 0.28 +0.8 696,143 + SM_b21062 0.28 -0.5 696,143 + SM_b21062 0.28 +0.1 696,144 - SM_b21062 0.28 -0.9 696,144 - SM_b21062 0.28 -0.9 696,144 - SM_b21062 0.28 -0.3 696,144 - SM_b21062 0.28 +0.7 696,144 - SM_b21062 0.28 -0.5 696,144 - SM_b21062 0.28 -0.9 696,144 - SM_b21062 0.28 +0.7 696,361 - SM_b21062 0.46 +0.6 696,433 - SM_b21062 0.52 -0.2 696,437 + SM_b21062 0.52 +0.5 696,437 + SM_b21062 0.52 -0.9 696,461 + SM_b21062 0.54 -0.2 696,461 + SM_b21062 0.54 +0.9 696,497 + SM_b21062 0.57 -0.3 696,513 - SM_b21062 0.58 -0.9 696,596 + SM_b21062 0.65 -0.3 696,597 - SM_b21062 0.65 -0.5 696,845 + SM_b21062 0.86 -0.3 696,846 - SM_b21062 0.86 +1.1 696,948 - -2.2 696,948 - +1.1 697,171 + +0.3 697,172 - -0.1 697,172 - +0.1 697,188 - +0.5 697,188 - -0.1 697,199 + +0.4 697,232 + SM_b21063 0.10 -2.9 697,300 - SM_b21063 0.15 +0.4 697,420 + SM_b21063 0.22 +0.1 697,529 + SM_b21063 0.29 +0.5 697,534 - SM_b21063 0.29 -2.4 697,534 - SM_b21063 0.29 -3.0 697,534 - SM_b21063 0.29 -0.5 697,554 + SM_b21063 0.31 +0.1 697,578 - SM_b21063 0.32 +0.9 697,719 + SM_b21063 0.41 +2.1 697,720 - SM_b21063 0.41 +0.1 697,722 + SM_b21063 0.41 +0.2 697,722 + SM_b21063 0.41 +0.5 697,755 + SM_b21063 0.44 -0.2 697,755 + SM_b21063 0.44 +0.6 697,756 - SM_b21063 0.44 -0.6 697,758 + SM_b21063 0.44 +0.2 697,851 + SM_b21063 0.50 +0.8 697,873 + SM_b21063 0.51 -0.3 697,918 + SM_b21063 0.54 +0.8 697,918 + SM_b21063 0.54 +0.7 697,919 - SM_b21063 0.54 +0.7 697,919 - SM_b21063 0.54 +1.5 698,156 + SM_b21063 0.69 +0.8 698,157 - SM_b21063 0.69 +0.9 698,340 + SM_b21063 0.81 -1.2 698,358 + SM_b21063 0.82 -0.1 698,359 - SM_b21063 0.82 -0.1 698,359 - SM_b21063 0.82 +3.4 698,411 + SM_b21063 0.85 -0.5 698,412 - SM_b21063 0.85 -0.9 698,412 - +1.1 698,425 + SM_b21063 0.86 +0.4 698,425 + SM_b21063 0.86 +0.7 698,714 + SM_b21064 0.14 -0.8 698,761 + SM_b21064 0.23 +1.5 698,761 + SM_b21064 0.23 +0.5 698,765 - SM_b21064 0.24 +0.2 698,817 + SM_b21064 0.33 -2.8 698,840 + SM_b21064 0.38 +1.2 698,840 + SM_b21064 0.38 -0.4 698,841 - SM_b21064 0.38 -1.4 698,858 + SM_b21064 0.41 +0.7 698,874 - SM_b21064 0.44 +1.1 698,874 - SM_b21064 0.44 +0.3 699,280 + +0.2 699,281 - -2.6 699,306 + SM_b21065 0.12 +1.2 699,307 - SM_b21065 0.12 +0.6 699,307 - SM_b21065 0.12 -0.1 699,307 - SM_b21065 0.12 -0.5 699,351 - SM_b21065 0.17 -0.8 699,372 + SM_b21065 0.19 -1.5 699,373 - SM_b21065 0.19 -1.0 699,415 - SM_b21065 0.23 -0.5 699,586 + SM_b21065 0.41 -0.2 699,636 - SM_b21065 0.46 +1.4 699,636 - SM_b21065 0.46 +0.3
Or see this region's nucleotide sequence