Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21056 and SM_b21057 overlap by 35 nucleotides SM_b21057 and SM_b21058 are separated by 52 nucleotides SM_b21058 and SM_b21059 are separated by 23 nucleotides SM_b21059 and SM_b21060 are separated by 4 nucleotides
SM_b21056: SM_b21056 - esterase, at 689,474 to 691,801
_b21056
SM_b21057: SM_b21057 - hypothetical protein, at 691,767 to 692,645
_b21057
SM_b21058: SM_b21058 - glucose-1-phosphate cytidylyltransferase, at 692,698 to 692,919
_b21058
SM_b21059: SM_b21059 - glucose-1-phosphate cytidylyltransferase, at 692,943 to 693,467
_b21059
SM_b21060: SM_b21060 - sugar nucleotide epimerase dehydratase, at 693,472 to 694,521
_b21060
Position (kb) 691
692
693 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 690.772 kb on + strand, within SM_b21056 at 690.773 kb on - strand, within SM_b21056 at 690.774 kb on + strand, within SM_b21056 at 690.775 kb on - strand, within SM_b21056 at 690.958 kb on + strand, within SM_b21056 at 691.109 kb on + strand, within SM_b21056 at 691.109 kb on + strand, within SM_b21056 at 691.118 kb on + strand, within SM_b21056 at 691.119 kb on - strand, within SM_b21056 at 691.178 kb on + strand, within SM_b21056 at 691.178 kb on + strand, within SM_b21056 at 691.183 kb on + strand, within SM_b21056 at 691.184 kb on - strand, within SM_b21056 at 691.242 kb on - strand, within SM_b21056 at 691.242 kb on - strand, within SM_b21056 at 691.242 kb on - strand, within SM_b21056 at 691.272 kb on - strand, within SM_b21056 at 691.303 kb on + strand, within SM_b21056 at 691.304 kb on - strand, within SM_b21056 at 691.304 kb on - strand, within SM_b21056 at 691.403 kb on + strand, within SM_b21056 at 691.403 kb on + strand, within SM_b21056 at 691.403 kb on + strand, within SM_b21056 at 691.403 kb on + strand, within SM_b21056 at 691.404 kb on - strand, within SM_b21056 at 691.660 kb on + strand at 691.660 kb on + strand at 691.661 kb on - strand at 691.676 kb on + strand at 691.676 kb on + strand at 691.734 kb on - strand at 691.760 kb on + strand at 691.761 kb on - strand at 692.068 kb on + strand, within SM_b21057 at 692.068 kb on + strand, within SM_b21057 at 692.068 kb on + strand, within SM_b21057 at 692.069 kb on - strand, within SM_b21057 at 692.069 kb on - strand, within SM_b21057 at 692.069 kb on - strand, within SM_b21057 at 692.069 kb on - strand, within SM_b21057 at 692.147 kb on + strand, within SM_b21057 at 692.147 kb on + strand, within SM_b21057 at 692.228 kb on + strand, within SM_b21057 at 692.236 kb on + strand, within SM_b21057 at 692.274 kb on + strand, within SM_b21057 at 692.275 kb on - strand, within SM_b21057 at 692.275 kb on - strand, within SM_b21057 at 692.531 kb on + strand, within SM_b21057 at 692.531 kb on + strand, within SM_b21057 at 692.532 kb on - strand, within SM_b21057 at 692.648 kb on + strand at 692.648 kb on + strand at 692.710 kb on - strand at 692.710 kb on - strand at 692.818 kb on + strand, within SM_b21058 at 692.819 kb on - strand, within SM_b21058 at 692.819 kb on - strand, within SM_b21058 at 692.872 kb on + strand, within SM_b21058 at 692.897 kb on - strand at 692.897 kb on - strand at 693.057 kb on - strand, within SM_b21059 at 693.288 kb on + strand, within SM_b21059 at 693.289 kb on - strand, within SM_b21059 at 693.395 kb on + strand, within SM_b21059 at 693.395 kb on + strand, within SM_b21059 at 693.396 kb on - strand, within SM_b21059 at 693.396 kb on - strand, within SM_b21059 at 693.396 kb on - strand, within SM_b21059 at 693.487 kb on - strand at 693.502 kb on + strand at 693.503 kb on - strand at 693.503 kb on - strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.506 kb on + strand at 693.507 kb on - strand at 693.507 kb on - strand at 693.507 kb on - strand at 693.507 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 690,772 + SM_b21056 0.56 +2.3 690,773 - SM_b21056 0.56 +0.5 690,774 + SM_b21056 0.56 +1.8 690,775 - SM_b21056 0.56 -0.9 690,958 + SM_b21056 0.64 +1.1 691,109 + SM_b21056 0.70 +0.2 691,109 + SM_b21056 0.70 -0.4 691,118 + SM_b21056 0.71 -0.5 691,119 - SM_b21056 0.71 +0.4 691,178 + SM_b21056 0.73 +1.1 691,178 + SM_b21056 0.73 -1.9 691,183 + SM_b21056 0.73 +1.4 691,184 - SM_b21056 0.73 +0.4 691,242 - SM_b21056 0.76 -0.2 691,242 - SM_b21056 0.76 +1.2 691,242 - SM_b21056 0.76 -1.0 691,272 - SM_b21056 0.77 +0.2 691,303 + SM_b21056 0.79 -0.4 691,304 - SM_b21056 0.79 +0.2 691,304 - SM_b21056 0.79 +0.3 691,403 + SM_b21056 0.83 +1.6 691,403 + SM_b21056 0.83 +0.3 691,403 + SM_b21056 0.83 -0.8 691,403 + SM_b21056 0.83 -2.3 691,404 - SM_b21056 0.83 -0.5 691,660 + +0.1 691,660 + -0.6 691,661 - -0.3 691,676 + -1.1 691,676 + -1.5 691,734 - -0.4 691,760 + +0.6 691,761 - -0.6 692,068 + SM_b21057 0.34 -1.0 692,068 + SM_b21057 0.34 -3.6 692,068 + SM_b21057 0.34 -0.5 692,069 - SM_b21057 0.34 -0.6 692,069 - SM_b21057 0.34 -0.4 692,069 - SM_b21057 0.34 -0.7 692,069 - SM_b21057 0.34 -0.3 692,147 + SM_b21057 0.43 -1.9 692,147 + SM_b21057 0.43 -0.1 692,228 + SM_b21057 0.52 +1.0 692,236 + SM_b21057 0.53 -1.0 692,274 + SM_b21057 0.58 -2.3 692,275 - SM_b21057 0.58 -0.0 692,275 - SM_b21057 0.58 -0.9 692,531 + SM_b21057 0.87 +0.1 692,531 + SM_b21057 0.87 +0.2 692,532 - SM_b21057 0.87 +1.2 692,648 + +0.7 692,648 + -1.2 692,710 - -1.6 692,710 - +0.5 692,818 + SM_b21058 0.54 -0.2 692,819 - SM_b21058 0.55 -3.7 692,819 - SM_b21058 0.55 +1.1 692,872 + SM_b21058 0.78 +0.1 692,897 - +0.3 692,897 - +0.6 693,057 - SM_b21059 0.22 -0.0 693,288 + SM_b21059 0.66 +0.3 693,289 - SM_b21059 0.66 +0.3 693,395 + SM_b21059 0.86 +0.1 693,395 + SM_b21059 0.86 -0.1 693,396 - SM_b21059 0.86 +1.3 693,396 - SM_b21059 0.86 +3.9 693,396 - SM_b21059 0.86 +0.2 693,487 - +0.3 693,502 + +0.2 693,503 - -0.3 693,503 - -0.9 693,506 + +0.2 693,506 + -1.2 693,506 + +0.5 693,506 + -3.3 693,506 + +1.1 693,506 + +0.1 693,507 - +1.4 693,507 - +0.1 693,507 - -0.7 693,507 - -2.3
Or see this region's nucleotide sequence