Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20835 and SM_b20836 overlap by 20 nucleotides SM_b20836 and SM_b20837 are separated by 540 nucleotides SM_b20837 and SM_b20838 are separated by 49 nucleotides
SM_b20835: SM_b20835 - hypothetical protein, at 627,125 to 628,120
_b20835
SM_b20836: SM_b20836 - heme-binding protein, at 628,101 to 628,430
_b20836
SM_b20837: SM_b20837 - hypothetical protein, at 628,971 to 629,195
_b20837
SM_b20838: SM_b20838 - secreted calcium-binding protein, at 629,245 to 630,306
_b20838
Position (kb) 628
629
630 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 628.107 kb on + strand at 628.130 kb on + strand at 628.131 kb on - strand at 628.232 kb on + strand, within SM_b20836 at 628.233 kb on - strand, within SM_b20836 at 628.321 kb on + strand, within SM_b20836 at 628.321 kb on + strand, within SM_b20836 at 628.321 kb on + strand, within SM_b20836 at 628.359 kb on - strand, within SM_b20836 at 628.405 kb on + strand at 628.476 kb on + strand at 628.476 kb on + strand at 628.477 kb on - strand at 628.477 kb on - strand at 628.481 kb on + strand at 628.481 kb on + strand at 628.481 kb on + strand at 628.482 kb on - strand at 628.505 kb on - strand at 628.644 kb on + strand at 628.645 kb on - strand at 628.645 kb on - strand at 628.697 kb on + strand at 628.697 kb on + strand at 628.697 kb on + strand at 628.697 kb on + strand at 628.697 kb on + strand at 628.698 kb on - strand at 628.698 kb on - strand at 628.698 kb on - strand at 628.854 kb on + strand at 628.855 kb on - strand at 628.972 kb on + strand at 628.972 kb on + strand at 628.972 kb on + strand at 628.973 kb on - strand at 628.973 kb on - strand at 628.973 kb on - strand at 628.974 kb on + strand at 629.059 kb on + strand, within SM_b20837 at 629.059 kb on + strand, within SM_b20837
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 628,107 + +1.1 628,130 + -0.9 628,131 - +1.7 628,232 + SM_b20836 0.40 +0.0 628,233 - SM_b20836 0.40 +1.1 628,321 + SM_b20836 0.67 +0.1 628,321 + SM_b20836 0.67 +1.3 628,321 + SM_b20836 0.67 -1.9 628,359 - SM_b20836 0.78 -0.0 628,405 + +0.0 628,476 + +0.5 628,476 + -0.6 628,477 - -0.4 628,477 - +2.1 628,481 + +0.3 628,481 + +0.1 628,481 + +0.0 628,482 - +0.1 628,505 - -0.4 628,644 + +1.5 628,645 - +0.4 628,645 - -0.2 628,697 + -1.8 628,697 + +0.4 628,697 + +0.2 628,697 + -0.5 628,697 + +0.3 628,698 - -0.0 628,698 - -1.2 628,698 - -0.1 628,854 + -0.1 628,855 - -0.7 628,972 + -0.8 628,972 + +0.4 628,972 + +0.1 628,973 - +1.0 628,973 - +1.0 628,973 - -2.9 628,974 + -0.3 629,059 + SM_b20837 0.39 -1.7 629,059 + SM_b20837 0.39 -0.5
Or see this region's nucleotide sequence