Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20710 and SM_b20711 are separated by 202 nucleotides SM_b20711 and SM_b20712 are separated by 239 nucleotides
SM_b20710: SM_b20710 - dehydrogenase, at 1,512,188 to 1,513,075
_b20710
SM_b20711: SM_b20711 - hypothetical protein, at 1,513,278 to 1,514,090
_b20711
SM_b20712: SM_b20712 - rhizopine uptake ABC transporter substrate-binding protein precursor, at 1,514,330 to 1,515,259
_b20712
Position (kb)
1513
1514
1515 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1512.535 kb on + strand, within SM_b20710 at 1512.536 kb on - strand, within SM_b20710 at 1512.536 kb on - strand, within SM_b20710 at 1512.536 kb on - strand, within SM_b20710 at 1512.723 kb on + strand, within SM_b20710 at 1512.724 kb on - strand, within SM_b20710 at 1512.840 kb on - strand, within SM_b20710 at 1512.840 kb on - strand, within SM_b20710 at 1512.923 kb on + strand, within SM_b20710 at 1512.923 kb on + strand, within SM_b20710 at 1512.923 kb on + strand, within SM_b20710 at 1512.923 kb on + strand, within SM_b20710 at 1512.936 kb on - strand, within SM_b20710 at 1513.025 kb on + strand at 1513.026 kb on - strand at 1513.033 kb on + strand at 1513.034 kb on - strand at 1513.034 kb on - strand at 1513.307 kb on + strand at 1513.307 kb on + strand at 1513.308 kb on - strand at 1513.308 kb on - strand at 1513.635 kb on - strand, within SM_b20711 at 1513.983 kb on + strand, within SM_b20711 at 1514.070 kb on + strand at 1514.070 kb on + strand at 1514.070 kb on + strand at 1514.463 kb on - strand, within SM_b20712 at 1514.463 kb on - strand, within SM_b20712 at 1514.463 kb on - strand, within SM_b20712 at 1514.648 kb on + strand, within SM_b20712 at 1514.648 kb on + strand, within SM_b20712 at 1514.649 kb on - strand, within SM_b20712 at 1514.649 kb on - strand, within SM_b20712 at 1514.677 kb on + strand, within SM_b20712 at 1514.678 kb on - strand, within SM_b20712 at 1514.753 kb on - strand, within SM_b20712 at 1514.753 kb on - strand, within SM_b20712
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 1,512,535 + SM_b20710 0.39 -0.7 1,512,536 - SM_b20710 0.39 -1.1 1,512,536 - SM_b20710 0.39 -0.2 1,512,536 - SM_b20710 0.39 -1.0 1,512,723 + SM_b20710 0.60 -1.3 1,512,724 - SM_b20710 0.60 -1.3 1,512,840 - SM_b20710 0.73 -3.3 1,512,840 - SM_b20710 0.73 +1.4 1,512,923 + SM_b20710 0.83 -1.3 1,512,923 + SM_b20710 0.83 -0.0 1,512,923 + SM_b20710 0.83 +0.2 1,512,923 + SM_b20710 0.83 -0.5 1,512,936 - SM_b20710 0.84 -3.4 1,513,025 + -0.4 1,513,026 - -0.7 1,513,033 + -2.0 1,513,034 - -0.5 1,513,034 - -0.9 1,513,307 + -0.2 1,513,307 + +0.3 1,513,308 - +0.1 1,513,308 - -0.5 1,513,635 - SM_b20711 0.44 -1.9 1,513,983 + SM_b20711 0.87 -1.0 1,514,070 + +0.5 1,514,070 + +0.2 1,514,070 + +0.1 1,514,463 - SM_b20712 0.14 +1.1 1,514,463 - SM_b20712 0.14 +3.3 1,514,463 - SM_b20712 0.14 +0.5 1,514,648 + SM_b20712 0.34 +0.6 1,514,648 + SM_b20712 0.34 -0.9 1,514,649 - SM_b20712 0.34 -0.1 1,514,649 - SM_b20712 0.34 +0.6 1,514,677 + SM_b20712 0.37 -0.6 1,514,678 - SM_b20712 0.37 +0.3 1,514,753 - SM_b20712 0.45 +0.1 1,514,753 - SM_b20712 0.45 +0.3
Or see this region's nucleotide sequence