Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20701 and SM_b20702 are separated by 182 nucleotides SM_b20702 and SM_b20703 are separated by 51 nucleotides SM_b20703 and SM_b20704 are separated by 276 nucleotides
SM_b20701: SM_b20701 - hypothetical protein, at 1,502,024 to 1,502,776
_b20701
SM_b20702: SM_b20702 - regulatory protein, at 1,502,959 to 1,504,623
_b20702
SM_b20703: SM_b20703 - hypothetical protein, at 1,504,675 to 1,505,184
_b20703
SM_b20704: SM_b20704 - glycogen synthase, at 1,505,461 to 1,506,921
_b20704
Position (kb)
1502
1503
1504
1505 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1502.404 kb on - strand, within SM_b20701 at 1502.969 kb on - strand at 1502.975 kb on + strand at 1502.975 kb on + strand at 1502.975 kb on + strand at 1502.976 kb on - strand at 1502.978 kb on + strand at 1502.978 kb on + strand at 1503.049 kb on + strand at 1503.050 kb on - strand at 1503.050 kb on - strand at 1503.050 kb on - strand at 1503.380 kb on + strand, within SM_b20702 at 1503.491 kb on - strand, within SM_b20702 at 1503.576 kb on + strand, within SM_b20702 at 1503.576 kb on + strand, within SM_b20702 at 1503.577 kb on - strand, within SM_b20702 at 1503.580 kb on + strand, within SM_b20702 at 1503.583 kb on - strand, within SM_b20702 at 1503.583 kb on - strand, within SM_b20702 at 1503.634 kb on + strand, within SM_b20702 at 1503.634 kb on + strand, within SM_b20702 at 1503.635 kb on - strand, within SM_b20702 at 1503.635 kb on - strand, within SM_b20702 at 1503.874 kb on + strand, within SM_b20702 at 1503.875 kb on - strand, within SM_b20702 at 1503.877 kb on + strand, within SM_b20702 at 1503.877 kb on + strand, within SM_b20702 at 1503.877 kb on + strand, within SM_b20702 at 1503.878 kb on - strand at 1503.985 kb on + strand, within SM_b20702 at 1504.007 kb on - strand, within SM_b20702 at 1504.055 kb on + strand, within SM_b20702 at 1504.282 kb on - strand at 1504.443 kb on - strand, within SM_b20702 at 1504.443 kb on - strand, within SM_b20702 at 1504.645 kb on + strand at 1504.676 kb on + strand at 1504.676 kb on + strand at 1504.677 kb on - strand at 1504.685 kb on + strand at 1504.685 kb on + strand at 1504.685 kb on + strand at 1504.686 kb on - strand at 1504.686 kb on - strand at 1504.686 kb on - strand at 1504.686 kb on - strand at 1504.686 kb on - strand at 1505.043 kb on + strand, within SM_b20703 at 1505.078 kb on + strand, within SM_b20703 at 1505.078 kb on + strand, within SM_b20703 at 1505.078 kb on + strand, within SM_b20703 at 1505.079 kb on - strand, within SM_b20703 at 1505.155 kb on + strand at 1505.156 kb on - strand at 1505.156 kb on - strand at 1505.214 kb on - strand at 1505.265 kb on + strand at 1505.352 kb on - strand at 1505.468 kb on + strand at 1505.468 kb on + strand at 1505.468 kb on + strand at 1505.525 kb on + strand at 1505.590 kb on + strand at 1505.590 kb on + strand at 1505.590 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 1,502,404 - SM_b20701 0.50 -0.6 1,502,969 - +0.8 1,502,975 + -0.1 1,502,975 + +0.8 1,502,975 + +0.7 1,502,976 - +0.4 1,502,978 + -2.8 1,502,978 + -0.6 1,503,049 + -0.8 1,503,050 - -3.4 1,503,050 - +0.7 1,503,050 - -0.5 1,503,380 + SM_b20702 0.25 +1.3 1,503,491 - SM_b20702 0.32 +1.3 1,503,576 + SM_b20702 0.37 -0.0 1,503,576 + SM_b20702 0.37 +1.6 1,503,577 - SM_b20702 0.37 +0.5 1,503,580 + SM_b20702 0.37 -0.4 1,503,583 - SM_b20702 0.37 -0.6 1,503,583 - SM_b20702 0.37 -1.6 1,503,634 + SM_b20702 0.41 +4.0 1,503,634 + SM_b20702 0.41 -0.1 1,503,635 - SM_b20702 0.41 -0.1 1,503,635 - SM_b20702 0.41 +0.8 1,503,874 + SM_b20702 0.55 -0.5 1,503,875 - SM_b20702 0.55 -0.5 1,503,877 + SM_b20702 0.55 +1.7 1,503,877 + SM_b20702 0.55 -1.2 1,503,877 + SM_b20702 0.55 -0.8 1,503,878 - +0.3 1,503,985 + SM_b20702 0.62 -0.5 1,504,007 - SM_b20702 0.63 -0.9 1,504,055 + SM_b20702 0.66 +1.9 1,504,282 - +0.0 1,504,443 - SM_b20702 0.89 +0.3 1,504,443 - SM_b20702 0.89 -0.2 1,504,645 + -0.3 1,504,676 + -1.5 1,504,676 + +3.1 1,504,677 - -2.0 1,504,685 + +1.3 1,504,685 + +0.7 1,504,685 + +0.5 1,504,686 - -0.7 1,504,686 - +0.7 1,504,686 - -0.3 1,504,686 - -0.0 1,504,686 - -0.6 1,505,043 + SM_b20703 0.72 -0.3 1,505,078 + SM_b20703 0.79 +0.1 1,505,078 + SM_b20703 0.79 -0.6 1,505,078 + SM_b20703 0.79 -0.7 1,505,079 - SM_b20703 0.79 +1.3 1,505,155 + -0.3 1,505,156 - +1.0 1,505,156 - -0.7 1,505,214 - +0.8 1,505,265 + +2.0 1,505,352 - -0.3 1,505,468 + -1.0 1,505,468 + -1.2 1,505,468 + +0.1 1,505,525 + -0.5 1,505,590 + +0.8 1,505,590 + -0.2 1,505,590 + +1.3
Or see this region's nucleotide sequence