Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20689 and SM_b20690 overlap by 4 nucleotides SM_b20690 and SM_b20691 are separated by 51 nucleotides SM_b20691 and SM_b20692 are separated by 309 nucleotides
SM_b20689: SM_b20689 - exodeoxyribonuclease III protein, at 1,492,447 to 1,493,220
_b20689
SM_b20690: SM_b20690 - hypothetical protein, at 1,493,217 to 1,493,543
_b20690
SM_b20691: SM_b20691 - hypothetical protein, at 1,493,595 to 1,493,816
_b20691
SM_b20692: SM_b20692 - 5-keto-D-gluconate 5-reductase, at 1,494,126 to 1,494,932
_b20692
Position (kb)
1493
1494 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1492.600 kb on + strand, within SM_b20689 at 1492.708 kb on - strand, within SM_b20689 at 1492.763 kb on - strand, within SM_b20689 at 1492.918 kb on + strand, within SM_b20689 at 1492.918 kb on + strand, within SM_b20689 at 1492.919 kb on - strand, within SM_b20689 at 1492.933 kb on + strand, within SM_b20689 at 1492.934 kb on - strand, within SM_b20689 at 1493.198 kb on + strand at 1493.198 kb on + strand at 1493.219 kb on - strand at 1493.219 kb on - strand at 1493.219 kb on - strand at 1493.325 kb on + strand, within SM_b20690 at 1493.498 kb on + strand, within SM_b20690 at 1493.548 kb on + strand at 1493.549 kb on - strand at 1493.549 kb on - strand at 1493.549 kb on - strand at 1493.597 kb on - strand at 1493.762 kb on + strand, within SM_b20691 at 1493.764 kb on + strand, within SM_b20691 at 1493.764 kb on + strand, within SM_b20691 at 1493.942 kb on + strand at 1493.942 kb on + strand at 1493.943 kb on - strand at 1494.157 kb on + strand at 1494.157 kb on + strand at 1494.157 kb on + strand at 1494.162 kb on + strand at 1494.162 kb on + strand at 1494.163 kb on - strand at 1494.163 kb on - strand at 1494.163 kb on - strand at 1494.163 kb on - strand at 1494.323 kb on - strand, within SM_b20692 at 1494.471 kb on + strand, within SM_b20692 at 1494.653 kb on + strand, within SM_b20692 at 1494.782 kb on + strand, within SM_b20692
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 1,492,600 + SM_b20689 0.20 -0.3 1,492,708 - SM_b20689 0.34 +0.8 1,492,763 - SM_b20689 0.41 +0.9 1,492,918 + SM_b20689 0.61 +3.1 1,492,918 + SM_b20689 0.61 -0.1 1,492,919 - SM_b20689 0.61 +0.6 1,492,933 + SM_b20689 0.63 +0.3 1,492,934 - SM_b20689 0.63 -0.9 1,493,198 + -0.7 1,493,198 + -0.4 1,493,219 - +1.0 1,493,219 - -0.7 1,493,219 - -1.0 1,493,325 + SM_b20690 0.33 +0.0 1,493,498 + SM_b20690 0.86 +0.7 1,493,548 + -0.1 1,493,549 - +0.3 1,493,549 - -0.7 1,493,549 - -2.1 1,493,597 - -0.5 1,493,762 + SM_b20691 0.75 -0.2 1,493,764 + SM_b20691 0.76 +2.1 1,493,764 + SM_b20691 0.76 +0.4 1,493,942 + +0.3 1,493,942 + -1.5 1,493,943 - -1.2 1,494,157 + -2.1 1,494,157 + -0.1 1,494,157 + +0.4 1,494,162 + -2.4 1,494,162 + -0.7 1,494,163 - +0.2 1,494,163 - +0.6 1,494,163 - -0.4 1,494,163 - -1.1 1,494,323 - SM_b20692 0.24 +0.0 1,494,471 + SM_b20692 0.43 +2.0 1,494,653 + SM_b20692 0.65 +0.4 1,494,782 + SM_b20692 0.81 -0.1
Or see this region's nucleotide sequence