Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20668 and SM_b20669 are separated by 11 nucleotides SM_b20669 and SM_b20670 are separated by 3 nucleotides
SM_b20668: SM_b20668 - hypothetical protein, at 1,468,947 to 1,469,852
_b20668
SM_b20669: SM_b20669 - hydroxypyruvate isomerase, at 1,469,864 to 1,470,640
_b20669
SM_b20670: SM_b20670 - hypothetical protein, at 1,470,644 to 1,471,921
_b20670
Position (kb)
1469
1470
1471 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1469.038 kb on - strand, within SM_b20668 at 1469.224 kb on + strand, within SM_b20668 at 1469.224 kb on + strand, within SM_b20668 at 1469.225 kb on - strand, within SM_b20668 at 1469.295 kb on + strand, within SM_b20668 at 1469.296 kb on - strand, within SM_b20668 at 1469.424 kb on + strand, within SM_b20668 at 1469.558 kb on - strand, within SM_b20668 at 1469.558 kb on - strand, within SM_b20668 at 1469.558 kb on - strand, within SM_b20668 at 1469.560 kb on - strand, within SM_b20668 at 1469.635 kb on - strand, within SM_b20668 at 1469.635 kb on - strand, within SM_b20668 at 1469.635 kb on - strand, within SM_b20668 at 1469.635 kb on - strand, within SM_b20668 at 1469.691 kb on - strand, within SM_b20668 at 1469.745 kb on + strand, within SM_b20668 at 1469.745 kb on + strand, within SM_b20668 at 1469.746 kb on - strand, within SM_b20668 at 1469.746 kb on - strand, within SM_b20668 at 1469.746 kb on - strand, within SM_b20668 at 1469.843 kb on + strand at 1469.850 kb on + strand at 1470.221 kb on + strand, within SM_b20669 at 1470.395 kb on + strand, within SM_b20669 at 1470.395 kb on + strand, within SM_b20669 at 1470.445 kb on + strand, within SM_b20669 at 1470.446 kb on - strand, within SM_b20669 at 1470.446 kb on - strand, within SM_b20669 at 1470.463 kb on + strand, within SM_b20669 at 1470.464 kb on - strand, within SM_b20669 at 1470.518 kb on + strand, within SM_b20669 at 1470.519 kb on - strand, within SM_b20669 at 1470.519 kb on - strand, within SM_b20669 at 1470.519 kb on - strand, within SM_b20669 at 1470.524 kb on + strand, within SM_b20669 at 1470.524 kb on + strand, within SM_b20669 at 1470.525 kb on - strand, within SM_b20669 at 1470.555 kb on - strand, within SM_b20669 at 1470.578 kb on + strand at 1470.579 kb on - strand at 1470.678 kb on - strand at 1470.890 kb on + strand, within SM_b20670 at 1470.891 kb on - strand, within SM_b20670 at 1470.891 kb on - strand, within SM_b20670 at 1471.022 kb on + strand, within SM_b20670 at 1471.255 kb on - strand, within SM_b20670 at 1471.350 kb on + strand, within SM_b20670 at 1471.480 kb on + strand, within SM_b20670 at 1471.481 kb on - strand, within SM_b20670 at 1471.481 kb on - strand, within SM_b20670 at 1471.635 kb on - strand, within SM_b20670
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 1,469,038 - SM_b20668 0.10 -0.2 1,469,224 + SM_b20668 0.31 +0.3 1,469,224 + SM_b20668 0.31 +0.7 1,469,225 - SM_b20668 0.31 -0.7 1,469,295 + SM_b20668 0.38 +0.7 1,469,296 - SM_b20668 0.39 -2.2 1,469,424 + SM_b20668 0.53 +0.2 1,469,558 - SM_b20668 0.67 +1.2 1,469,558 - SM_b20668 0.67 -3.0 1,469,558 - SM_b20668 0.67 +0.5 1,469,560 - SM_b20668 0.68 +1.7 1,469,635 - SM_b20668 0.76 -0.3 1,469,635 - SM_b20668 0.76 +0.4 1,469,635 - SM_b20668 0.76 -0.7 1,469,635 - SM_b20668 0.76 -0.2 1,469,691 - SM_b20668 0.82 +0.5 1,469,745 + SM_b20668 0.88 -2.6 1,469,745 + SM_b20668 0.88 +2.2 1,469,746 - SM_b20668 0.88 +0.2 1,469,746 - SM_b20668 0.88 -1.6 1,469,746 - SM_b20668 0.88 +0.9 1,469,843 + -0.4 1,469,850 + -0.6 1,470,221 + SM_b20669 0.46 +0.4 1,470,395 + SM_b20669 0.68 -1.8 1,470,395 + SM_b20669 0.68 -2.1 1,470,445 + SM_b20669 0.75 -0.0 1,470,446 - SM_b20669 0.75 +0.4 1,470,446 - SM_b20669 0.75 -0.3 1,470,463 + SM_b20669 0.77 -1.1 1,470,464 - SM_b20669 0.77 +1.3 1,470,518 + SM_b20669 0.84 -2.4 1,470,519 - SM_b20669 0.84 +2.3 1,470,519 - SM_b20669 0.84 -0.0 1,470,519 - SM_b20669 0.84 -1.5 1,470,524 + SM_b20669 0.85 -0.1 1,470,524 + SM_b20669 0.85 -1.1 1,470,525 - SM_b20669 0.85 -0.2 1,470,555 - SM_b20669 0.89 -2.1 1,470,578 + -0.1 1,470,579 - +1.8 1,470,678 - -0.0 1,470,890 + SM_b20670 0.19 +0.1 1,470,891 - SM_b20670 0.19 +1.7 1,470,891 - SM_b20670 0.19 +0.7 1,471,022 + SM_b20670 0.30 +0.3 1,471,255 - SM_b20670 0.48 -0.1 1,471,350 + SM_b20670 0.55 -1.7 1,471,480 + SM_b20670 0.65 -1.3 1,471,481 - SM_b20670 0.65 +0.6 1,471,481 - SM_b20670 0.65 +2.6 1,471,635 - SM_b20670 0.78 +1.5
Or see this region's nucleotide sequence