Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20570 and SM_b20571 are separated by 96 nucleotides SM_b20571 and SM_b21691 are separated by 16 nucleotides
SM_b20570: SM_b20570 - aliphatic sulfonate ABC transporter substrate-binding protein, at 1,582,692 to 1,583,684
_b20570
SM_b20571: SM_b20571 - aliphatic sulfonate ABC transporter permease, at 1,583,781 to 1,584,626
_b20571
SM_b21691: SM_b21691 - nitrilotriacetate monooxygenase subunit A, at 1,584,643 to 1,585,992
_b21691
Position (kb)
1583
1584
1585 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1582.892 kb on + strand, within SM_b20570 at 1582.892 kb on + strand, within SM_b20570 at 1582.962 kb on + strand, within SM_b20570 at 1582.962 kb on + strand, within SM_b20570 at 1582.963 kb on - strand, within SM_b20570 at 1583.243 kb on - strand, within SM_b20570 at 1583.264 kb on + strand, within SM_b20570 at 1583.264 kb on + strand, within SM_b20570 at 1583.283 kb on - strand, within SM_b20570 at 1583.329 kb on + strand, within SM_b20570 at 1583.330 kb on - strand, within SM_b20570 at 1583.330 kb on - strand, within SM_b20570 at 1583.543 kb on - strand, within SM_b20570 at 1583.777 kb on - strand at 1583.905 kb on + strand, within SM_b20571 at 1583.905 kb on + strand, within SM_b20571 at 1584.073 kb on + strand, within SM_b20571 at 1584.312 kb on + strand, within SM_b20571 at 1584.313 kb on - strand, within SM_b20571 at 1584.314 kb on + strand, within SM_b20571 at 1584.315 kb on - strand, within SM_b20571 at 1584.334 kb on - strand, within SM_b20571 at 1584.557 kb on - strand at 1584.645 kb on - strand at 1584.645 kb on - strand at 1584.767 kb on - strand at 1584.905 kb on + strand, within SM_b21691 at 1584.906 kb on - strand, within SM_b21691 at 1584.906 kb on - strand, within SM_b21691 at 1584.906 kb on - strand, within SM_b21691 at 1584.935 kb on + strand, within SM_b21691 at 1584.935 kb on + strand, within SM_b21691 at 1584.936 kb on - strand, within SM_b21691 at 1584.936 kb on - strand, within SM_b21691 at 1585.133 kb on + strand, within SM_b21691 at 1585.247 kb on + strand, within SM_b21691 at 1585.248 kb on - strand, within SM_b21691 at 1585.312 kb on + strand, within SM_b21691 at 1585.544 kb on + strand, within SM_b21691
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 1,582,892 + SM_b20570 0.20 +0.0 1,582,892 + SM_b20570 0.20 -1.5 1,582,962 + SM_b20570 0.27 +0.5 1,582,962 + SM_b20570 0.27 +0.3 1,582,963 - SM_b20570 0.27 +0.0 1,583,243 - SM_b20570 0.55 -2.5 1,583,264 + SM_b20570 0.58 +0.0 1,583,264 + SM_b20570 0.58 -0.0 1,583,283 - SM_b20570 0.60 -1.3 1,583,329 + SM_b20570 0.64 +1.3 1,583,330 - SM_b20570 0.64 -0.3 1,583,330 - SM_b20570 0.64 +0.5 1,583,543 - SM_b20570 0.86 +0.6 1,583,777 - +1.3 1,583,905 + SM_b20571 0.15 -0.1 1,583,905 + SM_b20571 0.15 +1.2 1,584,073 + SM_b20571 0.35 +1.5 1,584,312 + SM_b20571 0.63 +0.5 1,584,313 - SM_b20571 0.63 +2.3 1,584,314 + SM_b20571 0.63 -0.7 1,584,315 - SM_b20571 0.63 -3.4 1,584,334 - SM_b20571 0.65 +0.3 1,584,557 - -0.2 1,584,645 - +0.2 1,584,645 - -0.3 1,584,767 - +0.3 1,584,905 + SM_b21691 0.19 +0.1 1,584,906 - SM_b21691 0.19 -0.1 1,584,906 - SM_b21691 0.19 +0.3 1,584,906 - SM_b21691 0.19 +0.1 1,584,935 + SM_b21691 0.22 +0.5 1,584,935 + SM_b21691 0.22 -0.5 1,584,936 - SM_b21691 0.22 +0.4 1,584,936 - SM_b21691 0.22 -0.1 1,585,133 + SM_b21691 0.36 -3.1 1,585,247 + SM_b21691 0.45 -0.6 1,585,248 - SM_b21691 0.45 -1.3 1,585,312 + SM_b21691 0.50 -1.5 1,585,544 + SM_b21691 0.67 +0.2
Or see this region's nucleotide sequence