Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20541 and SM_b20542 are separated by 62 nucleotides SM_b20542 and SM_b20544 overlap by 117 nucleotides SM_b20544 and SM_b20543 overlap by 304 nucleotides
SM_b20541: SM_b20541 - protein in ISRm14, at 568,337 to 569,989
_b20541
SM_b20542: SM_b20542 - protein in ISRm14, at 570,052 to 570,405
_b20542
SM_b20544: SM_b20544 - protein in ISRm14, at 570,289 to 570,705
_b20544
SM_b20543: SM_b20543 - protein in ISRm14, at 570,402 to 570,845
_b20543
Position (kb)
570
571 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 570.129 kb on - strand, within SM_b20542 at 570.129 kb on - strand, within SM_b20542 at 570.900 kb on + strand at 570.968 kb on + strand at 570.968 kb on + strand at 570.968 kb on + strand at 570.969 kb on - strand at 570.975 kb on + strand at 570.975 kb on + strand at 570.976 kb on - strand at 570.976 kb on - strand at 570.976 kb on - strand at 570.991 kb on + strand at 570.992 kb on - strand at 570.992 kb on - strand at 570.993 kb on + strand at 570.993 kb on + strand at 570.994 kb on - strand at 570.994 kb on - strand at 570.994 kb on - strand at 571.020 kb on + strand at 571.020 kb on + strand at 571.021 kb on - strand at 571.026 kb on - strand at 571.047 kb on + strand at 571.048 kb on - strand at 571.149 kb on - strand at 571.194 kb on - strand at 571.194 kb on - strand at 571.194 kb on - strand at 571.197 kb on + strand at 571.198 kb on - strand at 571.198 kb on - strand at 571.198 kb on - strand at 571.245 kb on - strand at 571.251 kb on + strand at 571.307 kb on + strand at 571.307 kb on + strand at 571.307 kb on + strand at 571.307 kb on + strand at 571.308 kb on - strand at 571.349 kb on + strand at 571.355 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 570,129 - SM_b20542 0.22 -0.4 570,129 - SM_b20542 0.22 -0.8 570,900 + -1.1 570,968 + -0.3 570,968 + -1.7 570,968 + +1.1 570,969 - -0.8 570,975 + +0.9 570,975 + -1.0 570,976 - -0.8 570,976 - -0.3 570,976 - -1.4 570,991 + -1.2 570,992 - +1.2 570,992 - -0.3 570,993 + -0.7 570,993 + -0.5 570,994 - -1.2 570,994 - -0.7 570,994 - +0.4 571,020 + +0.2 571,020 + -0.1 571,021 - +0.2 571,026 - -0.1 571,047 + +1.0 571,048 - +0.7 571,149 - -1.6 571,194 - +0.3 571,194 - -0.7 571,194 - +1.0 571,197 + -0.3 571,198 - +0.0 571,198 - -0.2 571,198 - +0.9 571,245 - +0.3 571,251 + -0.4 571,307 + +2.2 571,307 + -0.3 571,307 + +0.7 571,307 + -2.4 571,308 - -0.6 571,349 + +0.3 571,355 + -2.0
Or see this region's nucleotide sequence