Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20539 and SM_b20540 are separated by 867 nucleotides SM_b20540 and SM_b20541 are separated by 587 nucleotides
SM_b20539: SM_b20539 - adenylate cyclase, at 564,786 to 566,660
_b20539
SM_b20540: SM_b20540 - hypothetical protein, at 567,528 to 567,749
_b20540
SM_b20541: SM_b20541 - protein in ISRm14, at 568,337 to 569,989
_b20541
Position (kb) 567
568 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 566.543 kb on - strand at 566.665 kb on + strand at 566.723 kb on - strand at 566.726 kb on + strand at 566.726 kb on + strand at 566.726 kb on + strand at 566.727 kb on - strand at 566.727 kb on - strand at 566.727 kb on - strand at 566.727 kb on - strand at 566.727 kb on - strand at 566.727 kb on - strand at 566.728 kb on + strand at 566.728 kb on + strand at 566.729 kb on - strand at 566.738 kb on + strand at 566.738 kb on + strand at 566.745 kb on + strand at 566.745 kb on + strand at 566.745 kb on + strand at 566.746 kb on - strand at 566.746 kb on - strand at 566.888 kb on + strand at 566.889 kb on - strand at 566.889 kb on - strand at 566.965 kb on - strand at 566.968 kb on - strand at 567.114 kb on + strand at 567.115 kb on - strand at 567.118 kb on - strand at 567.194 kb on + strand at 567.194 kb on + strand at 567.195 kb on - strand at 567.199 kb on + strand at 567.199 kb on + strand at 567.200 kb on - strand at 567.204 kb on - strand at 567.204 kb on - strand at 567.232 kb on + strand at 567.235 kb on + strand at 567.375 kb on + strand at 567.423 kb on + strand at 567.439 kb on + strand at 567.440 kb on - strand at 567.472 kb on + strand at 567.473 kb on - strand at 567.484 kb on + strand at 567.484 kb on + strand at 567.484 kb on + strand at 567.485 kb on - strand at 567.485 kb on - strand at 567.487 kb on + strand at 567.488 kb on - strand at 567.488 kb on - strand at 567.488 kb on - strand at 567.489 kb on + strand at 567.489 kb on + strand at 567.490 kb on - strand at 567.490 kb on - strand at 567.515 kb on + strand at 567.598 kb on - strand, within SM_b20540 at 567.816 kb on + strand at 567.833 kb on - strand at 567.872 kb on + strand at 567.970 kb on - strand at 567.990 kb on - strand at 568.167 kb on - strand at 568.203 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 566,543 - -2.1 566,665 + +1.1 566,723 - -0.3 566,726 + -0.4 566,726 + +1.6 566,726 + -3.4 566,727 - -0.9 566,727 - +1.3 566,727 - +1.6 566,727 - +1.4 566,727 - -0.0 566,727 - +1.2 566,728 + +1.5 566,728 + -2.2 566,729 - +0.2 566,738 + -0.3 566,738 + -0.5 566,745 + +0.7 566,745 + -1.0 566,745 + -0.2 566,746 - -0.1 566,746 - +2.0 566,888 + +0.3 566,889 - +1.8 566,889 - +4.3 566,965 - +0.2 566,968 - +0.6 567,114 + +0.9 567,115 - +1.2 567,118 - +1.1 567,194 + +0.1 567,194 + -0.2 567,195 - -0.5 567,199 + +0.4 567,199 + +0.3 567,200 - +0.2 567,204 - -0.2 567,204 - +0.1 567,232 + -1.4 567,235 + -2.1 567,375 + -1.2 567,423 + -0.4 567,439 + -0.0 567,440 - +0.4 567,472 + +0.5 567,473 - -0.8 567,484 + -1.0 567,484 + +1.0 567,484 + -1.5 567,485 - -1.8 567,485 - +1.2 567,487 + +0.0 567,488 - +0.6 567,488 - +0.2 567,488 - -0.8 567,489 + +0.7 567,489 + -0.1 567,490 - +0.8 567,490 - +0.7 567,515 + +0.0 567,598 - SM_b20540 0.32 +1.0 567,816 + -0.9 567,833 - -0.2 567,872 + -0.8 567,970 - -1.2 567,990 - +0.0 568,167 - +0.7 568,203 + -0.1
Or see this region's nucleotide sequence