Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20481 and SM_b20482 are separated by 1 nucleotides SM_b20482 and SM_b20483 are separated by 7 nucleotides
SM_b20481: SM_b20481 - asparagine synthetase (glutamine amidotransferase) protein, at 494,919 to 496,694
_b20481
SM_b20482: SM_b20482 - hypothetical protein, at 496,696 to 498,483
_b20482
SM_b20483: SM_b20483 - catabolite repressor protein, at 498,491 to 499,561
_b20483
Position (kb) 496
497
498
499 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 495.886 kb on + strand, within SM_b20481 at 495.961 kb on - strand, within SM_b20481 at 495.979 kb on - strand, within SM_b20481 at 495.979 kb on - strand, within SM_b20481 at 495.979 kb on - strand, within SM_b20481 at 496.018 kb on + strand, within SM_b20481 at 496.019 kb on - strand, within SM_b20481 at 496.229 kb on + strand, within SM_b20481 at 496.230 kb on - strand, within SM_b20481 at 496.268 kb on + strand, within SM_b20481 at 496.268 kb on + strand, within SM_b20481 at 496.269 kb on - strand, within SM_b20481 at 496.269 kb on - strand, within SM_b20481 at 496.304 kb on + strand, within SM_b20481 at 496.304 kb on + strand, within SM_b20481 at 496.305 kb on - strand, within SM_b20481 at 496.476 kb on + strand, within SM_b20481 at 496.477 kb on - strand, within SM_b20481 at 496.501 kb on - strand, within SM_b20481 at 496.501 kb on - strand, within SM_b20481 at 496.584 kb on + strand at 496.584 kb on + strand at 496.585 kb on - strand at 496.585 kb on - strand at 496.690 kb on + strand at 496.692 kb on + strand at 496.692 kb on + strand at 496.693 kb on - strand at 496.693 kb on - strand at 496.693 kb on - strand at 496.693 kb on - strand at 496.785 kb on + strand at 496.957 kb on + strand, within SM_b20482 at 496.958 kb on - strand, within SM_b20482 at 496.962 kb on - strand, within SM_b20482 at 497.027 kb on - strand, within SM_b20482 at 497.048 kb on - strand, within SM_b20482 at 497.048 kb on - strand, within SM_b20482 at 497.131 kb on + strand, within SM_b20482 at 497.131 kb on + strand, within SM_b20482 at 497.131 kb on + strand, within SM_b20482 at 497.132 kb on - strand, within SM_b20482 at 497.402 kb on - strand, within SM_b20482 at 497.402 kb on - strand, within SM_b20482 at 497.402 kb on - strand, within SM_b20482 at 497.430 kb on + strand, within SM_b20482 at 497.430 kb on + strand, within SM_b20482 at 497.431 kb on - strand, within SM_b20482 at 497.431 kb on - strand, within SM_b20482 at 497.431 kb on - strand, within SM_b20482 at 497.431 kb on - strand, within SM_b20482 at 497.542 kb on + strand, within SM_b20482 at 497.543 kb on - strand, within SM_b20482 at 497.820 kb on - strand, within SM_b20482 at 498.003 kb on + strand, within SM_b20482 at 498.003 kb on + strand, within SM_b20482 at 498.003 kb on + strand, within SM_b20482 at 498.003 kb on + strand, within SM_b20482 at 498.004 kb on - strand, within SM_b20482 at 498.004 kb on - strand, within SM_b20482 at 498.004 kb on - strand, within SM_b20482 at 498.188 kb on + strand, within SM_b20482 at 498.446 kb on + strand at 498.446 kb on + strand at 498.447 kb on - strand at 498.482 kb on - strand at 498.581 kb on + strand at 498.696 kb on + strand, within SM_b20483 at 498.696 kb on + strand, within SM_b20483 at 498.696 kb on + strand, within SM_b20483 at 498.697 kb on - strand, within SM_b20483 at 498.826 kb on - strand, within SM_b20483 at 498.878 kb on + strand, within SM_b20483 at 498.878 kb on + strand, within SM_b20483 at 498.879 kb on - strand, within SM_b20483 at 498.936 kb on - strand, within SM_b20483 at 498.936 kb on - strand, within SM_b20483 at 498.978 kb on + strand, within SM_b20483 at 499.108 kb on + strand, within SM_b20483 at 499.109 kb on - strand at 499.109 kb on - strand, within SM_b20483 at 499.115 kb on + strand, within SM_b20483 at 499.115 kb on + strand, within SM_b20483 at 499.116 kb on - strand, within SM_b20483 at 499.172 kb on - strand, within SM_b20483 at 499.191 kb on + strand, within SM_b20483 at 499.192 kb on - strand, within SM_b20483 at 499.274 kb on - strand, within SM_b20483 at 499.274 kb on - strand, within SM_b20483 at 499.328 kb on + strand, within SM_b20483 at 499.370 kb on + strand, within SM_b20483 at 499.399 kb on - strand, within SM_b20483 at 499.476 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 495,886 + SM_b20481 0.54 +0.2 495,961 - SM_b20481 0.59 +0.5 495,979 - SM_b20481 0.60 -0.7 495,979 - SM_b20481 0.60 -0.2 495,979 - SM_b20481 0.60 -0.2 496,018 + SM_b20481 0.62 -3.4 496,019 - SM_b20481 0.62 -1.2 496,229 + SM_b20481 0.74 -0.1 496,230 - SM_b20481 0.74 +1.4 496,268 + SM_b20481 0.76 -1.0 496,268 + SM_b20481 0.76 -0.2 496,269 - SM_b20481 0.76 +0.3 496,269 - SM_b20481 0.76 -0.5 496,304 + SM_b20481 0.78 -0.4 496,304 + SM_b20481 0.78 +0.2 496,305 - SM_b20481 0.78 -0.1 496,476 + SM_b20481 0.88 +0.5 496,477 - SM_b20481 0.88 -0.1 496,501 - SM_b20481 0.89 -0.7 496,501 - SM_b20481 0.89 -0.1 496,584 + -0.2 496,584 + -2.6 496,585 - -0.6 496,585 - +1.3 496,690 + +0.5 496,692 + -1.4 496,692 + -1.1 496,693 - -0.4 496,693 - -0.4 496,693 - +0.6 496,693 - +0.8 496,785 + -1.7 496,957 + SM_b20482 0.15 -0.5 496,958 - SM_b20482 0.15 -0.6 496,962 - SM_b20482 0.15 -0.1 497,027 - SM_b20482 0.19 -0.1 497,048 - SM_b20482 0.20 +0.2 497,048 - SM_b20482 0.20 -0.6 497,131 + SM_b20482 0.24 +0.1 497,131 + SM_b20482 0.24 +0.9 497,131 + SM_b20482 0.24 +0.7 497,132 - SM_b20482 0.24 -2.9 497,402 - SM_b20482 0.39 -0.1 497,402 - SM_b20482 0.39 -0.2 497,402 - SM_b20482 0.39 -0.7 497,430 + SM_b20482 0.41 -0.4 497,430 + SM_b20482 0.41 +0.8 497,431 - SM_b20482 0.41 +0.5 497,431 - SM_b20482 0.41 +0.6 497,431 - SM_b20482 0.41 -1.3 497,431 - SM_b20482 0.41 -1.4 497,542 + SM_b20482 0.47 -0.3 497,543 - SM_b20482 0.47 -1.9 497,820 - SM_b20482 0.63 -1.1 498,003 + SM_b20482 0.73 -0.4 498,003 + SM_b20482 0.73 +0.6 498,003 + SM_b20482 0.73 -0.6 498,003 + SM_b20482 0.73 -0.3 498,004 - SM_b20482 0.73 -0.3 498,004 - SM_b20482 0.73 +0.4 498,004 - SM_b20482 0.73 -1.7 498,188 + SM_b20482 0.83 +0.5 498,446 + -1.4 498,446 + -2.1 498,447 - +0.6 498,482 - +1.4 498,581 + +1.2 498,696 + SM_b20483 0.19 +1.2 498,696 + SM_b20483 0.19 +0.0 498,696 + SM_b20483 0.19 -0.2 498,697 - SM_b20483 0.19 +0.2 498,826 - SM_b20483 0.31 -0.1 498,878 + SM_b20483 0.36 +0.0 498,878 + SM_b20483 0.36 -0.3 498,879 - SM_b20483 0.36 +0.8 498,936 - SM_b20483 0.42 -3.5 498,936 - SM_b20483 0.42 -2.0 498,978 + SM_b20483 0.45 +1.8 499,108 + SM_b20483 0.58 +0.2 499,109 - -0.4 499,109 - SM_b20483 0.58 -0.4 499,115 + SM_b20483 0.58 -1.6 499,115 + SM_b20483 0.58 -0.1 499,116 - SM_b20483 0.58 -0.3 499,172 - SM_b20483 0.64 +0.4 499,191 + SM_b20483 0.65 -0.1 499,192 - SM_b20483 0.65 +0.1 499,274 - SM_b20483 0.73 +0.8 499,274 - SM_b20483 0.73 -0.4 499,328 + SM_b20483 0.78 +0.7 499,370 + SM_b20483 0.82 -0.4 499,399 - SM_b20483 0.85 +1.8 499,476 - -0.3
Or see this region's nucleotide sequence