Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20469 and SM_b20470 are separated by 668 nucleotides SM_b20470 and SM_b20471 are separated by 30 nucleotides SM_b20471 and SM_b20472 are separated by 13 nucleotides
SM_b20469: SM_b20469 - hypothetical protein, at 482,210 to 483,286
_b20469
SM_b20470: SM_b20470 - hypothetical protein, at 483,955 to 484,386
_b20470
SM_b20471: SM_b20471 - hypothetical protein, at 484,417 to 484,566
_b20471
SM_b20472: SM_b20472 - nodulation protein, at 484,580 to 486,412
_b20472
Position (kb) 483
484
485 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 483.025 kb on - strand, within SM_b20469 at 483.026 kb on + strand, within SM_b20469 at 483.026 kb on + strand, within SM_b20469 at 483.026 kb on + strand, within SM_b20469 at 483.027 kb on - strand, within SM_b20469 at 483.027 kb on - strand, within SM_b20469 at 483.027 kb on - strand, within SM_b20469 at 483.027 kb on - strand, within SM_b20469 at 483.040 kb on + strand, within SM_b20469 at 483.064 kb on + strand, within SM_b20469 at 483.064 kb on + strand, within SM_b20469 at 483.065 kb on - strand, within SM_b20469 at 483.066 kb on + strand at 483.331 kb on + strand at 483.332 kb on - strand at 483.372 kb on - strand at 483.387 kb on - strand at 483.393 kb on - strand at 483.393 kb on - strand at 483.414 kb on + strand at 483.453 kb on + strand at 483.454 kb on - strand at 483.468 kb on + strand at 483.479 kb on + strand at 483.479 kb on + strand at 483.480 kb on - strand at 483.509 kb on + strand at 483.546 kb on + strand at 483.546 kb on + strand at 483.626 kb on + strand at 483.709 kb on + strand at 483.823 kb on - strand at 483.823 kb on - strand at 483.852 kb on + strand at 484.023 kb on + strand, within SM_b20470 at 484.024 kb on - strand, within SM_b20470 at 484.047 kb on + strand, within SM_b20470 at 484.083 kb on - strand, within SM_b20470 at 484.193 kb on + strand, within SM_b20470 at 484.193 kb on + strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.237 kb on + strand, within SM_b20470 at 484.238 kb on - strand, within SM_b20470 at 484.238 kb on - strand, within SM_b20470 at 484.257 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.328 kb on - strand, within SM_b20470 at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.447 kb on - strand at 484.553 kb on - strand at 484.553 kb on - strand at 484.553 kb on - strand at 484.585 kb on + strand at 484.585 kb on + strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.590 kb on + strand at 484.595 kb on - strand at 484.608 kb on - strand at 484.721 kb on + strand at 484.722 kb on - strand at 484.722 kb on - strand at 484.776 kb on - strand, within SM_b20472 at 484.776 kb on - strand, within SM_b20472 at 484.817 kb on + strand, within SM_b20472 at 484.817 kb on + strand, within SM_b20472 at 484.818 kb on - strand, within SM_b20472 at 484.818 kb on - strand, within SM_b20472 at 484.914 kb on - strand, within SM_b20472 at 484.917 kb on + strand, within SM_b20472 at 484.918 kb on - strand, within SM_b20472 at 485.100 kb on + strand, within SM_b20472 at 485.100 kb on + strand, within SM_b20472 at 485.101 kb on - strand, within SM_b20472 at 485.101 kb on - strand, within SM_b20472 at 485.104 kb on + strand, within SM_b20472 at 485.156 kb on + strand, within SM_b20472 at 485.156 kb on + strand, within SM_b20472 at 485.157 kb on - strand, within SM_b20472 at 485.159 kb on + strand, within SM_b20472 at 485.160 kb on - strand, within SM_b20472 at 485.189 kb on + strand, within SM_b20472 at 485.191 kb on + strand, within SM_b20472 at 485.191 kb on + strand, within SM_b20472 at 485.192 kb on - strand, within SM_b20472 at 485.214 kb on - strand, within SM_b20472
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 483,025 - SM_b20469 0.76 -0.1 483,026 + SM_b20469 0.76 +0.5 483,026 + SM_b20469 0.76 +1.4 483,026 + SM_b20469 0.76 -0.4 483,027 - SM_b20469 0.76 -1.2 483,027 - SM_b20469 0.76 +0.6 483,027 - SM_b20469 0.76 -0.3 483,027 - SM_b20469 0.76 +0.8 483,040 + SM_b20469 0.77 -1.1 483,064 + SM_b20469 0.79 -2.1 483,064 + SM_b20469 0.79 +0.0 483,065 - SM_b20469 0.79 -1.2 483,066 + -1.1 483,331 + -2.8 483,332 - -1.6 483,372 - -2.9 483,387 - -0.1 483,393 - -0.5 483,393 - -0.3 483,414 + +0.1 483,453 + +0.9 483,454 - -0.4 483,468 + -0.2 483,479 + -0.7 483,479 + -0.1 483,480 - -1.7 483,509 + +0.5 483,546 + +0.3 483,546 + +1.5 483,626 + +1.5 483,709 + -0.4 483,823 - +0.1 483,823 - -1.0 483,852 + +0.3 484,023 + SM_b20470 0.16 -0.3 484,024 - SM_b20470 0.16 -2.8 484,047 + SM_b20470 0.21 -0.2 484,083 - SM_b20470 0.30 -0.2 484,193 + SM_b20470 0.55 -0.2 484,193 + SM_b20470 0.55 +0.1 484,194 - SM_b20470 0.55 +0.6 484,194 - SM_b20470 0.55 -0.2 484,194 - SM_b20470 0.55 -0.4 484,198 - SM_b20470 0.56 -0.2 484,198 - SM_b20470 0.56 -1.1 484,198 - SM_b20470 0.56 -1.3 484,198 - SM_b20470 0.56 -1.4 484,198 - SM_b20470 0.56 -1.0 484,237 + SM_b20470 0.65 +0.7 484,238 - SM_b20470 0.66 -0.9 484,238 - SM_b20470 0.66 -0.6 484,257 + SM_b20470 0.70 +0.6 484,327 + SM_b20470 0.86 -2.6 484,327 + SM_b20470 0.86 -0.0 484,327 + SM_b20470 0.86 +1.3 484,328 - SM_b20470 0.86 -2.6 484,444 + SM_b20471 0.18 +0.1 484,444 + SM_b20471 0.18 +0.6 484,444 + +0.9 484,444 + SM_b20471 0.18 +0.2 484,444 + SM_b20471 0.18 +0.6 484,445 - SM_b20471 0.19 +1.2 484,445 - SM_b20471 0.19 -0.2 484,445 - SM_b20471 0.19 -0.0 484,445 - SM_b20471 0.19 +1.4 484,445 - SM_b20471 0.19 +0.5 484,447 - +1.8 484,553 - +0.9 484,553 - +0.8 484,553 - +0.7 484,585 + -0.5 484,585 + +0.0 484,586 - +0.1 484,586 - -1.0 484,586 - -1.1 484,586 - +2.9 484,586 - -0.8 484,590 + -0.3 484,595 - +0.0 484,608 - +0.2 484,721 + -0.6 484,722 - -0.4 484,722 - -0.0 484,776 - SM_b20472 0.11 +1.2 484,776 - SM_b20472 0.11 -1.6 484,817 + SM_b20472 0.13 +0.3 484,817 + SM_b20472 0.13 +1.4 484,818 - SM_b20472 0.13 +0.2 484,818 - SM_b20472 0.13 -0.2 484,914 - SM_b20472 0.18 -0.6 484,917 + SM_b20472 0.18 +0.9 484,918 - SM_b20472 0.18 -0.9 485,100 + SM_b20472 0.28 -0.7 485,100 + SM_b20472 0.28 +0.0 485,101 - SM_b20472 0.28 +0.6 485,101 - SM_b20472 0.28 +1.2 485,104 + SM_b20472 0.29 -0.6 485,156 + SM_b20472 0.31 +1.2 485,156 + SM_b20472 0.31 -1.8 485,157 - SM_b20472 0.31 -2.1 485,159 + SM_b20472 0.32 -2.9 485,160 - SM_b20472 0.32 +1.2 485,189 + SM_b20472 0.33 +0.2 485,191 + SM_b20472 0.33 +0.5 485,191 + SM_b20472 0.33 -0.5 485,192 - SM_b20472 0.33 -0.7 485,214 - SM_b20472 0.35 -3.4
Or see this region's nucleotide sequence