Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20391 and SM_b20392 are separated by 35 nucleotides SM_b20392 and SM_b20393 are separated by 144 nucleotides SM_b20393 and SM_b20394 are separated by 23 nucleotides
SM_b20391: SM_b20391 - cellulose synthase catalytic subunit protein, at 403,650 to 405,644
_b20391
SM_b20392: SM_b20392 - transcriptional regulator NanR, at 405,680 to 406,387
_b20392
SM_b20393: SM_b20393 - ribulose bisphosphate carboxylaseoxygenase, large subunit protein, at 406,532 to 407,788
_b20393
SM_b20394: SM_b20394 - hypothetical protein, at 407,812 to 409,140
_b20394
Position (kb) 406
407
408 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 405.547 kb on - strand at 405.681 kb on + strand at 405.681 kb on + strand at 405.682 kb on - strand at 405.682 kb on - strand at 405.682 kb on - strand at 405.699 kb on + strand at 405.700 kb on - strand at 405.803 kb on + strand, within SM_b20392 at 405.804 kb on - strand, within SM_b20392 at 405.886 kb on - strand, within SM_b20392 at 405.887 kb on + strand, within SM_b20392 at 406.076 kb on + strand, within SM_b20392 at 406.076 kb on + strand, within SM_b20392 at 406.077 kb on - strand, within SM_b20392 at 406.207 kb on + strand, within SM_b20392 at 406.208 kb on - strand, within SM_b20392 at 406.208 kb on - strand, within SM_b20392 at 406.517 kb on + strand at 406.517 kb on + strand at 406.518 kb on - strand at 406.536 kb on + strand at 406.536 kb on + strand at 406.547 kb on + strand at 406.547 kb on + strand at 406.682 kb on - strand, within SM_b20393 at 406.836 kb on - strand, within SM_b20393 at 406.836 kb on - strand, within SM_b20393 at 406.836 kb on - strand, within SM_b20393 at 407.055 kb on - strand, within SM_b20393 at 407.174 kb on + strand, within SM_b20393 at 407.174 kb on + strand, within SM_b20393 at 407.175 kb on - strand, within SM_b20393 at 407.187 kb on + strand, within SM_b20393 at 407.188 kb on - strand, within SM_b20393 at 407.582 kb on + strand, within SM_b20393 at 407.582 kb on + strand, within SM_b20393 at 407.582 kb on + strand, within SM_b20393 at 407.583 kb on - strand, within SM_b20393 at 407.615 kb on + strand, within SM_b20393 at 407.615 kb on + strand, within SM_b20393 at 407.676 kb on + strand at 407.677 kb on - strand at 407.723 kb on + strand at 407.834 kb on - strand at 407.836 kb on + strand at 407.836 kb on + strand at 408.067 kb on + strand, within SM_b20394 at 408.068 kb on - strand, within SM_b20394 at 408.068 kb on - strand, within SM_b20394 at 408.113 kb on + strand, within SM_b20394 at 408.113 kb on + strand, within SM_b20394 at 408.113 kb on + strand, within SM_b20394 at 408.113 kb on + strand, within SM_b20394 at 408.113 kb on + strand, within SM_b20394 at 408.114 kb on - strand, within SM_b20394 at 408.241 kb on + strand, within SM_b20394 at 408.350 kb on + strand, within SM_b20394 at 408.350 kb on + strand, within SM_b20394 at 408.351 kb on - strand, within SM_b20394 at 408.529 kb on + strand, within SM_b20394 at 408.529 kb on + strand, within SM_b20394 at 408.529 kb on + strand, within SM_b20394 at 408.529 kb on + strand, within SM_b20394 at 408.529 kb on + strand, within SM_b20394 at 408.529 kb on + strand, within SM_b20394 at 408.530 kb on - strand, within SM_b20394 at 408.530 kb on - strand, within SM_b20394
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 405,547 - +0.3 405,681 + -0.8 405,681 + +0.2 405,682 - -1.3 405,682 - -0.6 405,682 - -1.6 405,699 + +0.8 405,700 - -0.3 405,803 + SM_b20392 0.17 -1.5 405,804 - SM_b20392 0.18 +1.4 405,886 - SM_b20392 0.29 +0.8 405,887 + SM_b20392 0.29 -1.6 406,076 + SM_b20392 0.56 +0.7 406,076 + SM_b20392 0.56 -0.1 406,077 - SM_b20392 0.56 +1.0 406,207 + SM_b20392 0.74 -4.5 406,208 - SM_b20392 0.75 +0.5 406,208 - SM_b20392 0.75 +0.8 406,517 + -2.9 406,517 + +1.0 406,518 - +0.2 406,536 + -1.8 406,536 + +2.6 406,547 + -0.7 406,547 + -0.4 406,682 - SM_b20393 0.12 +0.0 406,836 - SM_b20393 0.24 -0.6 406,836 - SM_b20393 0.24 +0.1 406,836 - SM_b20393 0.24 +0.1 407,055 - SM_b20393 0.42 -0.3 407,174 + SM_b20393 0.51 -0.1 407,174 + SM_b20393 0.51 +0.4 407,175 - SM_b20393 0.51 -1.3 407,187 + SM_b20393 0.52 -3.5 407,188 - SM_b20393 0.52 -0.3 407,582 + SM_b20393 0.84 -1.3 407,582 + SM_b20393 0.84 -0.0 407,582 + SM_b20393 0.84 +0.4 407,583 - SM_b20393 0.84 -1.4 407,615 + SM_b20393 0.86 -0.8 407,615 + SM_b20393 0.86 -1.6 407,676 + +0.7 407,677 - -0.1 407,723 + -1.1 407,834 - +1.0 407,836 + -1.5 407,836 + -2.3 408,067 + SM_b20394 0.19 -0.4 408,068 - SM_b20394 0.19 -0.3 408,068 - SM_b20394 0.19 +0.4 408,113 + SM_b20394 0.23 +0.8 408,113 + SM_b20394 0.23 +0.3 408,113 + SM_b20394 0.23 +2.1 408,113 + SM_b20394 0.23 -1.9 408,113 + SM_b20394 0.23 -0.7 408,114 - SM_b20394 0.23 -1.1 408,241 + SM_b20394 0.32 -0.1 408,350 + SM_b20394 0.40 +0.0 408,350 + SM_b20394 0.40 +1.0 408,351 - SM_b20394 0.41 +1.0 408,529 + SM_b20394 0.54 +0.8 408,529 + SM_b20394 0.54 -1.1 408,529 + SM_b20394 0.54 +0.2 408,529 + SM_b20394 0.54 +0.8 408,529 + SM_b20394 0.54 -0.8 408,529 + SM_b20394 0.54 +0.1 408,530 - SM_b20394 0.54 -0.5 408,530 - SM_b20394 0.54 +1.1
Or see this region's nucleotide sequence