Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20375 and SM_b20376 are separated by 203 nucleotides SM_b20376 and SM_b20377 are separated by 43 nucleotides SM_b20377 and SM_b20378 are separated by 33 nucleotides
SM_b20375: SM_b20375 - transcriptional regulator, at 386,667 to 387,437
_b20375
SM_b20376: SM_b20376 - hypothetical protein, at 387,641 to 388,021
_b20376
SM_b20377: SM_b20377 - translation initiation inhibitor protein, at 388,065 to 388,448
_b20377
SM_b20378: SM_b20378 - aldehyde dehydrogenase, at 388,482 to 389,945
_b20378
Position (kb) 388
389 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 387.753 kb on + strand, within SM_b20376 at 387.755 kb on + strand, within SM_b20376 at 387.756 kb on - strand, within SM_b20376 at 387.756 kb on - strand, within SM_b20376 at 387.795 kb on + strand, within SM_b20376 at 387.795 kb on + strand, within SM_b20376 at 387.796 kb on - strand, within SM_b20376 at 387.866 kb on + strand, within SM_b20376 at 387.867 kb on - strand, within SM_b20376 at 387.867 kb on - strand, within SM_b20376 at 387.929 kb on + strand, within SM_b20376 at 387.930 kb on - strand, within SM_b20376 at 388.180 kb on + strand, within SM_b20377 at 388.180 kb on + strand, within SM_b20377 at 388.180 kb on + strand, within SM_b20377 at 388.180 kb on + strand, within SM_b20377 at 388.180 kb on + strand, within SM_b20377 at 388.181 kb on - strand, within SM_b20377 at 388.564 kb on + strand at 388.565 kb on - strand at 388.693 kb on + strand, within SM_b20378 at 388.693 kb on + strand, within SM_b20378 at 388.694 kb on - strand, within SM_b20378 at 388.694 kb on - strand, within SM_b20378 at 388.965 kb on + strand, within SM_b20378 at 388.966 kb on - strand, within SM_b20378 at 388.966 kb on - strand, within SM_b20378 at 388.966 kb on - strand, within SM_b20378 at 388.966 kb on - strand, within SM_b20378 at 389.056 kb on + strand, within SM_b20378 at 389.057 kb on - strand, within SM_b20378 at 389.094 kb on - strand, within SM_b20378 at 389.094 kb on - strand, within SM_b20378
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 387,753 + SM_b20376 0.29 -3.5 387,755 + SM_b20376 0.30 +0.2 387,756 - SM_b20376 0.30 +0.2 387,756 - SM_b20376 0.30 +0.5 387,795 + SM_b20376 0.40 +0.8 387,795 + SM_b20376 0.40 -0.3 387,796 - SM_b20376 0.41 -2.7 387,866 + SM_b20376 0.59 +3.2 387,867 - SM_b20376 0.59 +1.5 387,867 - SM_b20376 0.59 -1.6 387,929 + SM_b20376 0.76 +2.6 387,930 - SM_b20376 0.76 -1.6 388,180 + SM_b20377 0.30 -0.7 388,180 + SM_b20377 0.30 -1.0 388,180 + SM_b20377 0.30 -0.6 388,180 + SM_b20377 0.30 -3.6 388,180 + SM_b20377 0.30 +0.0 388,181 - SM_b20377 0.30 +0.7 388,564 + -0.8 388,565 - -0.3 388,693 + SM_b20378 0.14 +0.2 388,693 + SM_b20378 0.14 -0.3 388,694 - SM_b20378 0.14 +1.9 388,694 - SM_b20378 0.14 +1.0 388,965 + SM_b20378 0.33 +1.5 388,966 - SM_b20378 0.33 +1.6 388,966 - SM_b20378 0.33 -2.6 388,966 - SM_b20378 0.33 -0.3 388,966 - SM_b20378 0.33 +0.1 389,056 + SM_b20378 0.39 -2.5 389,057 - SM_b20378 0.39 +0.2 389,094 - SM_b20378 0.42 -0.6 389,094 - SM_b20378 0.42 -0.1
Or see this region's nucleotide sequence