Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20367 and SM_b20368 are separated by 143 nucleotides SM_b20368 and SM_b20369 are separated by 5 nucleotides
SM_b20367: SM_b20367 - transcriptional regulator, at 379,530 to 380,222
_b20367
SM_b20368: SM_b20368 - hypothetical protein, at 380,366 to 381,379
_b20368
SM_b20369: SM_b20369 - hypothetical protein, at 381,385 to 382,626
_b20369
Position (kb) 380
381
382 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 379.403 kb on - strand at 379.411 kb on + strand at 379.411 kb on + strand at 379.412 kb on - strand at 379.443 kb on - strand at 379.532 kb on - strand at 379.532 kb on - strand at 379.627 kb on + strand, within SM_b20367 at 379.732 kb on + strand, within SM_b20367 at 379.859 kb on - strand, within SM_b20367 at 380.075 kb on - strand, within SM_b20367 at 380.080 kb on + strand, within SM_b20367 at 380.080 kb on + strand, within SM_b20367 at 380.080 kb on + strand, within SM_b20367 at 380.081 kb on - strand, within SM_b20367 at 380.081 kb on - strand, within SM_b20367 at 380.247 kb on - strand at 380.253 kb on + strand at 380.253 kb on + strand at 380.254 kb on - strand at 380.254 kb on - strand at 380.254 kb on - strand at 380.317 kb on + strand at 380.322 kb on + strand at 380.322 kb on + strand at 380.322 kb on + strand at 380.322 kb on + strand at 380.323 kb on - strand at 380.323 kb on - strand at 380.328 kb on + strand at 380.328 kb on + strand at 380.328 kb on + strand at 380.328 kb on + strand at 380.329 kb on - strand at 380.351 kb on + strand at 380.352 kb on - strand at 380.501 kb on + strand, within SM_b20368 at 380.501 kb on + strand, within SM_b20368 at 380.502 kb on - strand, within SM_b20368 at 380.988 kb on - strand, within SM_b20368 at 380.988 kb on - strand, within SM_b20368 at 381.044 kb on - strand, within SM_b20368 at 381.065 kb on - strand, within SM_b20368 at 381.074 kb on + strand, within SM_b20368 at 381.075 kb on - strand, within SM_b20368 at 381.135 kb on + strand, within SM_b20368 at 381.273 kb on + strand, within SM_b20368 at 381.273 kb on + strand, within SM_b20368 at 381.274 kb on - strand, within SM_b20368 at 381.274 kb on - strand, within SM_b20368 at 381.309 kb on + strand at 381.310 kb on - strand at 381.892 kb on - strand, within SM_b20369 at 382.025 kb on - strand, within SM_b20369 at 382.025 kb on - strand, within SM_b20369 at 382.025 kb on - strand, within SM_b20369 at 382.222 kb on + strand, within SM_b20369 at 382.223 kb on - strand, within SM_b20369
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 379,403 - +0.5 379,411 + -1.6 379,411 + -0.4 379,412 - -2.8 379,443 - +1.2 379,532 - -2.2 379,532 - +1.8 379,627 + SM_b20367 0.14 +0.8 379,732 + SM_b20367 0.29 +0.4 379,859 - SM_b20367 0.47 +0.2 380,075 - SM_b20367 0.79 +0.0 380,080 + SM_b20367 0.79 -0.1 380,080 + SM_b20367 0.79 +0.2 380,080 + SM_b20367 0.79 -0.8 380,081 - SM_b20367 0.80 -1.2 380,081 - SM_b20367 0.80 +1.9 380,247 - -1.5 380,253 + +0.5 380,253 + -2.1 380,254 - +0.2 380,254 - +0.2 380,254 - -3.1 380,317 + +0.2 380,322 + +1.5 380,322 + -0.9 380,322 + -2.5 380,322 + -0.5 380,323 - -2.6 380,323 - +0.5 380,328 + -0.8 380,328 + -0.8 380,328 + -0.3 380,328 + +0.2 380,329 - +1.3 380,351 + +0.0 380,352 - -3.1 380,501 + SM_b20368 0.13 -3.2 380,501 + SM_b20368 0.13 -0.4 380,502 - SM_b20368 0.13 -0.1 380,988 - SM_b20368 0.61 -0.9 380,988 - SM_b20368 0.61 -0.0 381,044 - SM_b20368 0.67 +5.1 381,065 - SM_b20368 0.69 -3.5 381,074 + SM_b20368 0.70 -0.3 381,075 - SM_b20368 0.70 -0.3 381,135 + SM_b20368 0.76 -1.8 381,273 + SM_b20368 0.89 -0.3 381,273 + SM_b20368 0.89 +0.2 381,274 - SM_b20368 0.90 -1.3 381,274 - SM_b20368 0.90 +1.1 381,309 + +0.7 381,310 - +0.8 381,892 - SM_b20369 0.41 -0.7 382,025 - SM_b20369 0.52 +0.7 382,025 - SM_b20369 0.52 +0.2 382,025 - SM_b20369 0.52 -2.3 382,222 + SM_b20369 0.67 -0.5 382,223 - SM_b20369 0.67 +1.2
Or see this region's nucleotide sequence