Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20285 and SM_b20286 are separated by 202 nucleotides SM_b20286 and SM_b20287 are separated by 18 nucleotides SM_b20287 and SM_b20288 overlap by 4 nucleotides
SM_b20285: SM_b20285 - transcriptional regulator, at 289,741 to 290,718
_b20285
SM_b20286: SM_b20286 - hypothetical protein, at 290,921 to 292,000
_b20286
SM_b20287: SM_b20287 - hypothetical protein, at 292,019 to 292,726
_b20287
SM_b20288: SM_b20288 - hypothetical protein, at 292,723 to 294,123
_b20288
Position (kb) 290
291
292
293 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 289.973 kb on + strand, within SM_b20285 at 289.974 kb on - strand, within SM_b20285 at 289.974 kb on - strand, within SM_b20285 at 289.974 kb on - strand, within SM_b20285 at 289.974 kb on - strand, within SM_b20285 at 289.974 kb on - strand, within SM_b20285 at 290.092 kb on + strand, within SM_b20285 at 290.092 kb on + strand, within SM_b20285 at 290.422 kb on + strand, within SM_b20285 at 290.701 kb on + strand at 290.735 kb on - strand at 290.896 kb on + strand at 290.896 kb on + strand at 290.896 kb on + strand at 290.926 kb on + strand at 290.926 kb on + strand at 290.926 kb on + strand at 290.927 kb on - strand at 290.932 kb on + strand at 290.932 kb on + strand at 291.252 kb on - strand, within SM_b20286 at 291.684 kb on + strand, within SM_b20286 at 291.782 kb on + strand, within SM_b20286 at 291.782 kb on + strand, within SM_b20286 at 291.783 kb on - strand, within SM_b20286 at 291.788 kb on + strand, within SM_b20286 at 291.788 kb on + strand, within SM_b20286 at 291.788 kb on + strand, within SM_b20286 at 291.788 kb on + strand, within SM_b20286 at 291.789 kb on - strand, within SM_b20286 at 291.789 kb on - strand, within SM_b20286 at 291.789 kb on - strand, within SM_b20286 at 292.061 kb on - strand at 292.149 kb on + strand, within SM_b20287 at 292.164 kb on - strand, within SM_b20287 at 292.257 kb on - strand, within SM_b20287 at 292.278 kb on + strand, within SM_b20287 at 292.279 kb on - strand, within SM_b20287 at 292.639 kb on + strand, within SM_b20287 at 292.711 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 289,973 + SM_b20285 0.24 +1.1 289,974 - SM_b20285 0.24 +0.1 289,974 - SM_b20285 0.24 -0.1 289,974 - SM_b20285 0.24 -1.1 289,974 - SM_b20285 0.24 -0.0 289,974 - SM_b20285 0.24 -0.3 290,092 + SM_b20285 0.36 -0.5 290,092 + SM_b20285 0.36 -0.3 290,422 + SM_b20285 0.70 -0.7 290,701 + -0.2 290,735 - -1.2 290,896 + -0.1 290,896 + -0.4 290,896 + +0.7 290,926 + -0.2 290,926 + -0.2 290,926 + -0.3 290,927 - -0.0 290,932 + +0.2 290,932 + -0.2 291,252 - SM_b20286 0.31 +0.5 291,684 + SM_b20286 0.71 -1.0 291,782 + SM_b20286 0.80 -2.8 291,782 + SM_b20286 0.80 -1.8 291,783 - SM_b20286 0.80 -1.4 291,788 + SM_b20286 0.80 -0.2 291,788 + SM_b20286 0.80 -1.9 291,788 + SM_b20286 0.80 -2.8 291,788 + SM_b20286 0.80 +0.4 291,789 - SM_b20286 0.80 -1.2 291,789 - SM_b20286 0.80 +0.9 291,789 - SM_b20286 0.80 +1.5 292,061 - -0.2 292,149 + SM_b20287 0.18 -1.4 292,164 - SM_b20287 0.20 +0.1 292,257 - SM_b20287 0.34 -0.1 292,278 + SM_b20287 0.37 +0.1 292,279 - SM_b20287 0.37 -1.3 292,639 + SM_b20287 0.88 -0.3 292,711 + -1.5
Or see this region's nucleotide sequence