Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20281 and SM_b20282 are separated by 3 nucleotides SM_b20282 and SM_b20283 are separated by 10 nucleotides SM_b20283 and SM_b20284 are separated by 84 nucleotides
SM_b20281: SM_b20281 - spermidine/putrescine ABC transporter ATP-binding protein, at 285,617 to 286,687
_b20281
SM_b20282: SM_b20282 - spermidine/putrescine ABC transporter permease, at 286,691 to 287,482
_b20282
SM_b20283: SM_b20283 - spermidine/putrescine ABC transporter permease, at 287,493 to 288,476
_b20283
SM_b20284: SM_b20284 - spermidine/putrescine ABC transporter substrate-binding protein, at 288,561 to 289,661
_b20284
Position (kb) 287
288
289 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 286.504 kb on - strand, within SM_b20281 at 286.504 kb on - strand, within SM_b20281 at 286.504 kb on - strand, within SM_b20281 at 286.555 kb on + strand, within SM_b20281 at 286.883 kb on + strand, within SM_b20282 at 287.231 kb on + strand, within SM_b20282 at 287.278 kb on - strand, within SM_b20282 at 287.415 kb on + strand at 287.415 kb on + strand at 287.416 kb on - strand at 287.434 kb on - strand at 287.473 kb on - strand at 287.494 kb on + strand at 287.704 kb on + strand, within SM_b20283 at 287.704 kb on + strand, within SM_b20283 at 287.704 kb on + strand, within SM_b20283 at 287.705 kb on - strand, within SM_b20283 at 287.706 kb on + strand, within SM_b20283 at 287.706 kb on + strand, within SM_b20283 at 287.706 kb on + strand, within SM_b20283 at 287.706 kb on + strand, within SM_b20283 at 287.707 kb on - strand, within SM_b20283 at 287.707 kb on - strand, within SM_b20283 at 287.707 kb on - strand, within SM_b20283 at 287.707 kb on - strand, within SM_b20283 at 287.707 kb on - strand, within SM_b20283 at 287.839 kb on + strand, within SM_b20283 at 287.840 kb on - strand, within SM_b20283 at 287.857 kb on + strand, within SM_b20283 at 287.857 kb on + strand, within SM_b20283 at 287.858 kb on - strand, within SM_b20283 at 287.858 kb on - strand, within SM_b20283 at 287.872 kb on + strand, within SM_b20283 at 287.872 kb on + strand, within SM_b20283 at 287.872 kb on + strand, within SM_b20283 at 287.873 kb on - strand, within SM_b20283 at 287.873 kb on - strand, within SM_b20283 at 287.931 kb on - strand, within SM_b20283 at 288.085 kb on + strand, within SM_b20283 at 288.085 kb on + strand, within SM_b20283 at 288.085 kb on + strand, within SM_b20283 at 288.085 kb on + strand, within SM_b20283 at 288.086 kb on - strand, within SM_b20283 at 288.086 kb on - strand, within SM_b20283 at 288.241 kb on + strand, within SM_b20283 at 288.380 kb on - strand at 288.418 kb on + strand at 288.467 kb on + strand at 288.776 kb on + strand, within SM_b20284 at 288.791 kb on + strand, within SM_b20284 at 288.791 kb on + strand, within SM_b20284 at 288.791 kb on + strand, within SM_b20284 at 288.792 kb on - strand, within SM_b20284 at 288.793 kb on + strand, within SM_b20284 at 288.794 kb on - strand, within SM_b20284 at 288.839 kb on - strand, within SM_b20284 at 288.839 kb on - strand, within SM_b20284 at 288.851 kb on - strand, within SM_b20284 at 288.851 kb on - strand, within SM_b20284 at 288.851 kb on - strand, within SM_b20284 at 288.874 kb on - strand, within SM_b20284 at 288.874 kb on - strand, within SM_b20284 at 288.926 kb on + strand, within SM_b20284 at 288.937 kb on + strand, within SM_b20284 at 288.937 kb on + strand, within SM_b20284 at 288.938 kb on - strand, within SM_b20284 at 288.938 kb on - strand, within SM_b20284 at 288.938 kb on - strand, within SM_b20284 at 288.938 kb on - strand, within SM_b20284 at 288.986 kb on - strand, within SM_b20284 at 288.986 kb on - strand, within SM_b20284 at 288.988 kb on + strand, within SM_b20284 at 288.989 kb on - strand, within SM_b20284 at 289.022 kb on - strand, within SM_b20284 at 289.022 kb on - strand, within SM_b20284 at 289.072 kb on + strand, within SM_b20284 at 289.073 kb on - strand, within SM_b20284 at 289.138 kb on + strand, within SM_b20284 at 289.139 kb on - strand, within SM_b20284 at 289.139 kb on - strand, within SM_b20284 at 289.139 kb on - strand, within SM_b20284 at 289.156 kb on + strand, within SM_b20284 at 289.156 kb on + strand, within SM_b20284 at 289.156 kb on + strand, within SM_b20284 at 289.156 kb on + strand, within SM_b20284 at 289.199 kb on + strand, within SM_b20284 at 289.199 kb on + strand, within SM_b20284 at 289.200 kb on - strand, within SM_b20284 at 289.201 kb on + strand, within SM_b20284 at 289.252 kb on + strand, within SM_b20284 at 289.291 kb on + strand, within SM_b20284 at 289.292 kb on - strand, within SM_b20284 at 289.439 kb on - strand, within SM_b20284
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0005 mg/ml remove 286,504 - SM_b20281 0.83 +0.5 286,504 - SM_b20281 0.83 +1.1 286,504 - SM_b20281 0.83 -0.1 286,555 + SM_b20281 0.88 +0.3 286,883 + SM_b20282 0.24 -0.6 287,231 + SM_b20282 0.68 -0.4 287,278 - SM_b20282 0.74 +1.3 287,415 + +3.3 287,415 + +0.0 287,416 - +0.4 287,434 - +0.4 287,473 - -0.1 287,494 + -0.1 287,704 + SM_b20283 0.21 -0.3 287,704 + SM_b20283 0.21 -1.7 287,704 + SM_b20283 0.21 -0.3 287,705 - SM_b20283 0.22 +1.0 287,706 + SM_b20283 0.22 -0.6 287,706 + SM_b20283 0.22 -0.3 287,706 + SM_b20283 0.22 -2.3 287,706 + SM_b20283 0.22 -0.5 287,707 - SM_b20283 0.22 -1.3 287,707 - SM_b20283 0.22 +0.5 287,707 - SM_b20283 0.22 -0.3 287,707 - SM_b20283 0.22 +0.7 287,707 - SM_b20283 0.22 -0.3 287,839 + SM_b20283 0.35 -0.8 287,840 - SM_b20283 0.35 -0.2 287,857 + SM_b20283 0.37 -1.0 287,857 + SM_b20283 0.37 -0.7 287,858 - SM_b20283 0.37 +0.1 287,858 - SM_b20283 0.37 +0.3 287,872 + SM_b20283 0.39 -0.5 287,872 + SM_b20283 0.39 -0.2 287,872 + SM_b20283 0.39 +1.3 287,873 - SM_b20283 0.39 -3.0 287,873 - SM_b20283 0.39 +0.0 287,931 - SM_b20283 0.45 +0.1 288,085 + SM_b20283 0.60 -0.2 288,085 + SM_b20283 0.60 -2.1 288,085 + SM_b20283 0.60 -0.7 288,085 + SM_b20283 0.60 -1.7 288,086 - SM_b20283 0.60 +2.3 288,086 - SM_b20283 0.60 -1.1 288,241 + SM_b20283 0.76 -0.9 288,380 - +0.7 288,418 + +0.9 288,467 + -0.1 288,776 + SM_b20284 0.20 -0.2 288,791 + SM_b20284 0.21 +1.2 288,791 + SM_b20284 0.21 -0.9 288,791 + SM_b20284 0.21 +2.0 288,792 - SM_b20284 0.21 -1.0 288,793 + SM_b20284 0.21 +0.5 288,794 - SM_b20284 0.21 -1.0 288,839 - SM_b20284 0.25 -0.6 288,839 - SM_b20284 0.25 -1.1 288,851 - SM_b20284 0.26 -1.9 288,851 - SM_b20284 0.26 +0.9 288,851 - SM_b20284 0.26 -0.3 288,874 - SM_b20284 0.28 +0.6 288,874 - SM_b20284 0.28 -0.5 288,926 + SM_b20284 0.33 -0.4 288,937 + SM_b20284 0.34 +0.1 288,937 + SM_b20284 0.34 -0.1 288,938 - SM_b20284 0.34 +0.9 288,938 - SM_b20284 0.34 +0.5 288,938 - SM_b20284 0.34 +0.9 288,938 - SM_b20284 0.34 +1.4 288,986 - SM_b20284 0.39 -2.7 288,986 - SM_b20284 0.39 -1.1 288,988 + SM_b20284 0.39 +1.2 288,989 - SM_b20284 0.39 -0.5 289,022 - SM_b20284 0.42 +0.7 289,022 - SM_b20284 0.42 -0.8 289,072 + SM_b20284 0.46 +1.2 289,073 - SM_b20284 0.47 +1.9 289,138 + SM_b20284 0.52 +0.1 289,139 - SM_b20284 0.52 +0.4 289,139 - SM_b20284 0.52 +1.7 289,139 - SM_b20284 0.52 -2.3 289,156 + SM_b20284 0.54 +0.4 289,156 + SM_b20284 0.54 +1.2 289,156 + SM_b20284 0.54 +0.3 289,156 + SM_b20284 0.54 -0.2 289,199 + SM_b20284 0.58 -0.7 289,199 + SM_b20284 0.58 +1.1 289,200 - SM_b20284 0.58 -0.3 289,201 + SM_b20284 0.58 +0.7 289,252 + SM_b20284 0.63 -1.2 289,291 + SM_b20284 0.66 +0.1 289,292 - SM_b20284 0.66 +0.8 289,439 - SM_b20284 0.80 +0.1
Or see this region's nucleotide sequence