Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20005
Experiment: Cisplatin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.0005 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 7,549 | + | SM_b20004 | 0.31 | -0.1 | |
| 7,806 | - | SM_b20004 | 0.59 | +0.1 | |
| 7,813 | + | SM_b20004 | 0.60 | +0.1 | |
| 7,980 | + | SM_b20004 | 0.79 | +1.3 | |
| 7,981 | - | SM_b20004 | 0.79 | +0.2 | |
| 7,981 | - | SM_b20004 | 0.79 | +0.9 | |
| 7,981 | - | SM_b20004 | 0.79 | +0.1 | |
| 7,981 | - | SM_b20004 | 0.79 | -0.7 | |
| 8,092 | + | -1.7 | |||
| 8,093 | - | -0.5 | |||
| 8,093 | - | +1.1 | |||
| 8,298 | + | +0.3 | |||
| 8,298 | + | -1.7 | |||
| 8,298 | + | -2.2 | |||
| 8,299 | - | -0.4 | |||
| 8,499 | + | SM_b20005 | 0.34 | -0.5 | |
| 8,764 | - | SM_b20005 | 0.78 | -0.6 | |
| 8,770 | - | SM_b20005 | 0.79 | +0.3 | |
| 8,774 | - | SM_b20005 | 0.79 | -2.1 | |
| 8,812 | - | SM_b20005 | 0.85 | -1.3 | |
| 9,500 | - | SM_b20006 | 0.43 | -0.1 | |
| 9,561 | - | SM_b20006 | 0.50 | -1.9 | |
| 9,695 | + | SM_b20006 | 0.64 | +0.4 |
Or see this region's nucleotide sequence