Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4529
Experiment: Sisomicin 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,992,447 | + | +0.4 | |||
4,992,512 | + | Pf1N1B4_4528 | 0.53 | -0.9 | |
4,992,555 | - | Pf1N1B4_4528 | 0.57 | -0.6 | |
4,992,686 | + | Pf1N1B4_4528 | 0.69 | +0.8 | |
4,992,728 | + | Pf1N1B4_4528 | 0.73 | +1.7 | |
4,992,728 | + | Pf1N1B4_4528 | 0.73 | -1.6 | |
4,992,729 | - | Pf1N1B4_4528 | 0.73 | -0.4 | |
4,992,729 | - | Pf1N1B4_4528 | 0.73 | +0.0 | |
4,993,008 | + | +0.4 | |||
4,993,030 | + | -1.0 | |||
4,993,065 | + | -0.6 | |||
4,993,106 | + | -2.2 | |||
4,993,106 | + | -0.2 | |||
4,993,106 | + | +1.0 | |||
4,993,106 | + | -0.9 | |||
4,993,106 | + | -0.9 | |||
4,993,107 | - | -1.2 | |||
4,993,107 | - | -1.2 | |||
4,993,107 | - | -0.2 | |||
4,993,167 | - | -0.0 | |||
4,993,273 | - | Pf1N1B4_4529 | 0.16 | -1.7 | |
4,993,739 | + | -1.0 | |||
4,993,868 | - | +0.6 | |||
4,993,868 | - | +0.4 | |||
4,994,143 | - | Pf1N1B4_4530 | 0.37 | +0.7 | |
4,994,143 | - | Pf1N1B4_4530 | 0.37 | -1.2 | |
4,994,179 | - | Pf1N1B4_4530 | 0.44 | -2.4 | |
4,994,322 | + | Pf1N1B4_4530 | 0.70 | -2.2 |
Or see this region's nucleotide sequence