Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4225

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
4,680,137	-		Pf1N1B4_4223	0.84	+0.9
4,680,244	-				+1.6
4,680,303	+				+1.6
4,680,380	-				+0.6
4,680,403	-				-0.5
4,680,433	+				+0.0
4,680,433	+				-0.7
4,680,437	+				-1.2
4,680,437	+				+0.6
4,680,438	-				+0.6
4,680,542	+				+0.5
4,680,793	+				+0.6
4,680,946	+				+0.7
4,680,946	+				+0.3
4,680,946	+				+0.6
4,680,947	-				-1.4
4,680,982	+				+1.6
4,680,982	+				-1.2
4,681,083	+				-1.4
4,681,083	+		Pf1N1B4_4225	0.14	+0.6
4,681,396	+		Pf1N1B4_4225	0.47	+0.0
4,681,405	+		Pf1N1B4_4225	0.48	-0.4
4,681,499	-		Pf1N1B4_4225	0.58	-0.5
4,681,657	+		Pf1N1B4_4225	0.74	-2.6
4,681,658	-		Pf1N1B4_4225	0.74	-1.6
4,681,669	+				+2.3
4,681,670	-		Pf1N1B4_4225	0.75	-1.8
4,681,670	-				-0.4
4,681,772	+		Pf1N1B4_4225	0.86	+0.0
4,681,882	-				-0.2
4,681,882	-				-0.1
4,681,980	+				-0.7
4,681,980	+				-0.1
4,681,982	+				-1.7
4,681,983	-				+0.2
4,682,148	-		Pf1N1B4_4226	0.19	-1.0
4,682,172	-		Pf1N1B4_4226	0.22	+2.0
4,682,246	+		Pf1N1B4_4226	0.31	-0.1
4,682,270	-		Pf1N1B4_4226	0.34	-0.2
4,682,341	+		Pf1N1B4_4226	0.42	-1.0
4,682,342	-		Pf1N1B4_4226	0.42	+0.4
4,682,342	-				+0.6
4,682,343	+				-0.4
4,682,344	-		Pf1N1B4_4226	0.42	+2.4
4,682,344	-		Pf1N1B4_4226	0.42	-1.4
4,682,344	-		Pf1N1B4_4226	0.42	-1.2
4,682,376	+		Pf1N1B4_4226	0.46	+0.7
4,682,377	-		Pf1N1B4_4226	0.46	-2.4
4,682,381	-		Pf1N1B4_4226	0.47	+1.8
4,682,383	+		Pf1N1B4_4226	0.47	+0.2
4,682,384	-		Pf1N1B4_4226	0.47	+1.6
4,682,425	+		Pf1N1B4_4226	0.52	-0.7
4,682,426	-		Pf1N1B4_4226	0.52	-0.1
4,682,426	-		Pf1N1B4_4226	0.52	-0.1
4,682,426	-		Pf1N1B4_4226	0.52	+1.2
4,682,447	-		Pf1N1B4_4226	0.55	-0.2
4,682,449	+		Pf1N1B4_4226	0.55	-0.3
4,682,450	-		Pf1N1B4_4226	0.55	+0.4
4,682,632	+		Pf1N1B4_4226	0.77	+0.4
4,682,633	-		Pf1N1B4_4226	0.77	-0.2
4,682,759	+				-1.4
4,682,759	+				-0.7
4,682,760	-				-1.0
4,682,760	-				+0.2
4,682,801	+				+1.3
4,682,837	+				-2.4
4,682,838	-				+0.7