Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2643

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
2,981,942	+				-0.2
2,981,955	+				-0.2
2,981,955	+				+0.4
2,981,955	+				+2.0
2,981,955	+				-0.6
2,981,955	+				+1.1
2,981,955	+				-0.6
2,981,955	+				-0.2
2,981,955	+				-0.2
2,981,955	+				+0.2
2,981,955	+				-1.3
2,981,955	+				-0.4
2,981,955	+				+1.1
2,981,955	+				+0.2
2,981,955	+				-0.4
2,981,956	-				+0.4
2,981,956	-				-0.9
2,981,956	-				-0.9
2,981,956	-				+1.0
2,981,956	-				-0.2
2,981,956	-				+1.8
2,981,956	-				+1.4
2,982,121	+		Pf1N1B4_2642	0.23	-0.2
2,982,122	-		Pf1N1B4_2642	0.23	-0.2
2,982,409	+		Pf1N1B4_2642	0.63	+1.0
2,982,410	-		Pf1N1B4_2642	0.63	-0.0
2,982,584	+		Pf1N1B4_2642	0.88	+0.4
2,982,584	+		Pf1N1B4_2642	0.88	-1.8
2,982,584	+		Pf1N1B4_2642	0.88	+1.1
2,982,584	+		Pf1N1B4_2642	0.88	-0.6
2,982,752	+				-0.4
2,982,752	+				-1.2
2,982,752	+				+0.8
2,982,752	+				-1.8
2,982,752	+				-1.8
2,982,753	-				+1.4
2,982,753	-				-0.6
2,982,753	-				-0.1
2,982,753	-				+0.0
2,982,753	-				-1.4
2,982,753	-				-0.9
2,982,753	-				+0.8
2,982,753	-				-0.2
2,982,753	-				-0.5
2,982,753	-				-0.2
2,982,753	-				-0.4
2,982,838	+				+0.1
2,982,838	+				-0.0
2,982,838	+				+0.8
2,982,839	-				+1.4
2,982,839	-				-0.4
2,982,839	-				-0.9
2,982,915	+		Pf1N1B4_2643	0.18	-0.8
2,982,915	+		Pf1N1B4_2643	0.18	-1.4
2,982,969	-		Pf1N1B4_2643	0.27	-0.9
2,983,419	+				-0.6
2,983,419	+				+0.3
2,983,420	-				-0.2
2,983,420	-				-0.2
2,983,518	+				+0.4
2,983,519	-				+1.2
2,983,535	+				+1.4
2,983,535	+				+0.7
2,983,535	+				-0.9
2,983,535	+				+1.4
2,983,535	+				+0.9
2,983,535	+				-1.4
2,983,535	+				-1.2
2,983,535	+				+1.2
2,983,535	+				-0.8
2,983,535	+				+1.1
2,983,535	+				-1.4
2,983,535	+				-0.4
2,983,535	+				-0.3
2,983,536	-				+1.4
2,983,536	-				+0.6
2,983,536	-				+0.2
2,983,536	-				+1.4
2,983,536	-				+0.9
2,983,536	-				-0.2
2,983,536	-				+0.7
2,983,850	+				+0.7
2,983,851	-				+0.9
2,983,860	+				-0.3
2,983,860	+				+1.4
2,983,860	+				-1.6
2,983,881	+				-0.8
2,983,882	-				+0.1
2,983,882	-				-0.6
2,983,912	-				+2.0
2,983,948	-				-1.6
2,983,961	-				-0.6
2,983,961	-				-1.9
2,983,961	-				-0.6
2,983,961	-				+1.4
2,983,970	+				-1.9
2,983,971	-				-1.4
2,983,971	-				-0.6
2,983,971	-				+0.4
2,983,971	-				-0.8
2,984,000	+				-0.6
2,984,000	+				+1.0
2,984,000	+				+2.0
2,984,000	+				-0.5
2,984,000	+				-0.8
2,984,000	+				-0.2
2,984,000	+				+1.0
2,984,001	-				+0.4
2,984,001	-				+1.0
2,984,001	-				+0.2
2,984,003	+				+0.5
2,984,003	+				+1.0
2,984,003	+				-1.6
2,984,003	+				-1.2
2,984,004	-				+0.4
2,984,004	-				-0.9
2,984,030	+				+0.7
2,984,030	+				-1.2
2,984,108	+		Pf1N1B4_2645	0.12	+0.1
2,984,108	+		Pf1N1B4_2645	0.12	-0.8
2,984,109	-		Pf1N1B4_2645	0.13	-1.2
2,984,109	-		Pf1N1B4_2645	0.13	+0.1
2,984,159	+		Pf1N1B4_2645	0.18	+0.2
2,984,159	+		Pf1N1B4_2645	0.18	+1.0
2,984,196	-		Pf1N1B4_2645	0.23	-1.1
2,984,393	+		Pf1N1B4_2645	0.45	+0.4