Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2354

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
2,666,920	+		Pf1N1B4_2352	0.69	+1.5
2,666,920	+		Pf1N1B4_2352	0.69	-1.1
2,666,920	+		Pf1N1B4_2352	0.69	+1.7
2,666,921	-		Pf1N1B4_2352	0.69	-1.8
2,666,921	-		Pf1N1B4_2352	0.69	+0.1
2,666,921	-		Pf1N1B4_2352	0.69	-0.8
2,666,921	-		Pf1N1B4_2352	0.69	+1.1
2,666,929	+		Pf1N1B4_2352	0.70	+1.7
2,666,930	-		Pf1N1B4_2352	0.70	+1.2
2,667,088	+		Pf1N1B4_2352	0.86	+0.7
2,667,089	-		Pf1N1B4_2352	0.86	+1.8
2,667,108	-		Pf1N1B4_2352	0.88	+0.1
2,667,109	+		Pf1N1B4_2352	0.88	+1.5
2,667,109	+		Pf1N1B4_2352	0.88	+0.3
2,667,109	+		Pf1N1B4_2352	0.88	+2.1
2,667,109	+		Pf1N1B4_2352	0.88	-0.1
2,667,109	+		Pf1N1B4_2352	0.88	+1.5
2,667,109	+		Pf1N1B4_2352	0.88	+0.9
2,667,109	+				+2.5
2,667,109	+		Pf1N1B4_2352	0.88	+2.2
2,667,109	+		Pf1N1B4_2352	0.88	+0.5
2,667,109	+		Pf1N1B4_2352	0.88	-0.1
2,667,109	+		Pf1N1B4_2352	0.88	+0.9
2,667,109	+		Pf1N1B4_2352	0.88	+0.5
2,667,110	-		Pf1N1B4_2352	0.88	+1.8
2,667,110	-				-1.1
2,667,110	-		Pf1N1B4_2352	0.88	-0.5
2,667,110	-		Pf1N1B4_2352	0.88	+0.7
2,667,110	-		Pf1N1B4_2352	0.88	+1.7
2,667,110	-		Pf1N1B4_2352	0.88	+1.3
2,667,110	-		Pf1N1B4_2352	0.88	+1.3
2,667,110	-		Pf1N1B4_2352	0.88	+0.6
2,667,110	-		Pf1N1B4_2352	0.88	+1.5
2,667,110	-		Pf1N1B4_2352	0.88	-1.7
2,667,162	-				+0.5
2,667,170	+				-1.3
2,667,170	+				+0.7
2,667,171	-				-1.1
2,667,172	+				-0.1
2,667,172	+				+1.0
2,667,172	+				-0.7
2,667,172	+				+0.5
2,667,189	-				+1.0
2,667,328	-				-0.5
2,667,379	+				-2.7
2,667,379	+				-1.0
2,667,379	+				-1.1
2,667,380	-				-2.3
2,667,380	-				+2.0
2,667,380	-				+1.5
2,667,383	+				-0.8
2,667,383	+				+1.5
2,667,383	+				-1.1
2,667,383	+				-0.2
2,667,383	+				+0.7
2,667,383	+				+1.8
2,667,384	-				-1.1
2,667,384	-				+2.1
2,667,384	-				-0.6
2,667,384	-				-0.1
2,667,384	-				-2.3
2,667,384	-				+0.4
2,667,384	-				-1.5
2,667,384	-				+1.5
2,667,384	-				-0.4
2,667,384	-				-0.6
2,667,384	-				+0.8
2,667,446	-				+0.6
2,667,446	-				-0.2
2,667,670	-		Pf1N1B4_2353	0.53	-0.1
2,667,709	+		Pf1N1B4_2353	0.63	-0.5
2,667,709	+		Pf1N1B4_2353	0.63	+0.4
2,667,709	+		Pf1N1B4_2353	0.63	+1.3
2,667,709	+		Pf1N1B4_2353	0.63	+1.5
2,667,709	+		Pf1N1B4_2353	0.63	-0.3
2,667,709	+		Pf1N1B4_2353	0.63	+1.5
2,667,709	+		Pf1N1B4_2353	0.63	+0.5
2,667,709	+		Pf1N1B4_2353	0.63	-1.8
2,667,710	-		Pf1N1B4_2353	0.63	-0.1
2,667,710	-		Pf1N1B4_2353	0.63	+0.5
2,667,710	-		Pf1N1B4_2353	0.63	-1.5
2,667,710	-		Pf1N1B4_2353	0.63	+0.3
2,667,710	-		Pf1N1B4_2353	0.63	+0.3
2,667,829	-				-0.6
2,667,857	+				-0.5
2,667,858	-				-1.7
2,667,925	+				-0.8
2,667,925	+				-0.5
2,667,925	+				-1.1
2,667,925	+				-1.8
2,667,926	-				-1.7
2,667,926	-				+0.4
2,667,926	-				+0.9
2,667,926	-				-2.2
2,667,926	-				+0.1
2,667,926	-				-1.1
2,667,926	-				-0.3
2,667,926	-				-0.6
2,667,926	-				-2.5
2,667,926	-				+0.2
2,667,926	-				-2.0
2,667,926	-				-0.1
2,667,959	+		Pf1N1B4_2354	0.11	+0.2
2,667,959	+		Pf1N1B4_2354	0.11	-1.1
2,667,959	+		Pf1N1B4_2354	0.11	-1.1
2,667,959	+		Pf1N1B4_2354	0.11	-0.5
2,667,959	+		Pf1N1B4_2354	0.11	-1.5
2,667,960	-		Pf1N1B4_2354	0.12	-1.8
2,667,960	-		Pf1N1B4_2354	0.12	-0.0
2,667,960	-		Pf1N1B4_2354	0.12	+1.5
2,668,160	-		Pf1N1B4_2354	0.66	+1.5
2,668,217	+		Pf1N1B4_2354	0.82	-1.4
2,668,217	+		Pf1N1B4_2354	0.82	+0.7
2,668,217	+		Pf1N1B4_2354	0.82	-0.5
2,668,217	+		Pf1N1B4_2354	0.82	-0.3
2,668,218	-		Pf1N1B4_2354	0.82	-0.8
2,668,218	-		Pf1N1B4_2354	0.82	-0.6
2,668,218	-		Pf1N1B4_2354	0.82	-0.1
2,668,218	-		Pf1N1B4_2354	0.82	-1.5
2,668,218	-		Pf1N1B4_2354	0.82	+0.2
2,668,432	-		Pf1N1B4_2355	0.26	+2.5
2,668,432	-		Pf1N1B4_2355	0.26	-0.3
2,668,432	-		Pf1N1B4_2355	0.26	+1.9
2,668,702	+		Pf1N1B4_2355	0.77	-1.3
2,668,702	+		Pf1N1B4_2355	0.77	-1.1
2,668,703	-		Pf1N1B4_2355	0.77	+0.7
2,668,703	-		Pf1N1B4_2355	0.77	+0.2
2,668,703	-		Pf1N1B4_2355	0.77	-0.8
2,668,706	+		Pf1N1B4_2355	0.77	-0.9
2,668,706	+		Pf1N1B4_2355	0.77	+0.9
2,668,707	-		Pf1N1B4_2355	0.78	-0.1
2,668,771	+		Pf1N1B4_2355	0.90	-0.8
2,668,772	-		Pf1N1B4_2355	0.90	-0.8
2,668,823	-				-0.3
2,668,823	-				-0.3
2,668,823	-				-1.0
2,668,863	+		Pf1N1B4_2356	0.46	+2.5
2,668,863	+		Pf1N1B4_2356	0.46	-1.7
2,668,863	+		Pf1N1B4_2356	0.46	-0.7
2,668,863	+		Pf1N1B4_2356	0.46	-0.3
2,668,863	+		Pf1N1B4_2356	0.46	-0.1
2,668,863	+		Pf1N1B4_2356	0.46	+1.9
2,668,863	+		Pf1N1B4_2356	0.46	+0.2
2,668,863	+		Pf1N1B4_2356	0.46	-1.1
2,668,863	+		Pf1N1B4_2356	0.46	-1.7
2,668,863	+		Pf1N1B4_2356	0.46	-0.1
2,668,864	-		Pf1N1B4_2356	0.46	+1.1
2,668,864	-		Pf1N1B4_2356	0.46	+0.8
2,668,864	-		Pf1N1B4_2356	0.46	+1.8
2,668,864	-		Pf1N1B4_2356	0.46	-0.6
2,668,961	+				+0.2
2,668,961	+				+0.2
2,668,962	-				-1.5
2,668,968	+				+0.5
2,669,068	+				+0.3
2,669,069	-				+0.0
2,669,101	+				+0.5
2,669,102	-				-0.6
2,669,102	-				-0.3
2,669,102	-				-0.5
2,669,102	-				+2.2
2,669,102	-				+1.3
2,669,102	-				+0.2
2,669,102	-				-1.3
2,669,237	-		Pf1N1B4_2357	0.14	-0.1