Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1714

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
1,960,839	+		Pf1N1B4_1713	0.22	+0.3
1,960,839	+		Pf1N1B4_1713	0.22	+0.6
1,960,840	-		Pf1N1B4_1713	0.22	+1.2
1,960,954	-		Pf1N1B4_1713	0.39	+1.7
1,960,954	-		Pf1N1B4_1713	0.39	-1.5
1,960,954	-		Pf1N1B4_1713	0.39	+0.2
1,961,052	+		Pf1N1B4_1713	0.54	-1.2
1,961,052	+		Pf1N1B4_1713	0.54	-0.9
1,961,052	+		Pf1N1B4_1713	0.54	+1.3
1,961,184	+		Pf1N1B4_1713	0.74	+0.7
1,961,184	+		Pf1N1B4_1713	0.74	-0.3
1,961,185	-		Pf1N1B4_1713	0.74	-0.3
1,961,185	-		Pf1N1B4_1713	0.74	+1.1
1,961,209	-		Pf1N1B4_1713	0.78	-0.2
1,961,344	-				-0.6
1,961,369	-				+0.3
1,961,369	-				-0.7
1,961,470	-				-0.2
1,961,498	-				-2.0
1,961,532	+				+0.7
1,961,533	-				+0.1
1,961,533	-				-0.3
1,961,550	-				+0.7
1,961,572	+				+0.1
1,961,572	+				+0.3
1,961,572	+				+0.7
1,961,572	+				+0.7
1,961,573	-				+0.3
1,961,650	+				+0.1
1,961,650	+				-0.7
1,961,650	+				-1.3
1,961,761	+				+1.1
1,961,781	-				+1.7
1,961,859	+				-0.0
1,961,859	+				+1.7
1,961,860	-				-0.2
1,961,860	-				-0.5
1,961,860	-				+0.3
1,961,968	-		Pf1N1B4_1714	0.17	-1.8
1,961,968	-		Pf1N1B4_1714	0.17	+1.2
1,962,033	+		Pf1N1B4_1714	0.26	+0.9
1,962,034	-		Pf1N1B4_1714	0.26	-0.7
1,962,369	+		Pf1N1B4_1714	0.69	+1.7
1,962,387	+		Pf1N1B4_1714	0.71	-0.3
1,962,387	+		Pf1N1B4_1714	0.71	+1.4
1,962,387	+		Pf1N1B4_1714	0.71	+1.4
1,962,388	-		Pf1N1B4_1714	0.71	+1.4
1,962,388	-		Pf1N1B4_1714	0.71	-0.7
1,962,388	-				+0.7
1,962,388	-		Pf1N1B4_1714	0.71	+0.0
1,962,388	-		Pf1N1B4_1714	0.71	+1.5
1,962,388	-		Pf1N1B4_1714	0.71	+0.7
1,962,388	-		Pf1N1B4_1714	0.71	+0.3
1,962,435	+		Pf1N1B4_1714	0.77	+1.1
1,962,436	-		Pf1N1B4_1714	0.77	+0.0
1,962,436	-		Pf1N1B4_1714	0.77	+1.1
1,962,657	-				-0.0
1,962,660	+				+0.4
1,962,660	+				+2.2
1,962,660	+				+0.7
1,962,660	+				+0.9
1,962,660	+				-0.2
1,962,660	+				-1.3
1,962,660	+				-1.3
1,962,661	-				-1.2
1,962,661	-				-0.8
1,962,661	-				-0.5
1,962,661	-				+0.7
1,962,661	-				+2.1
1,962,661	-				+1.1
1,962,661	-				+1.2
1,962,661	-				-1.2
1,962,661	-				-1.5
1,962,661	-				-0.0
1,962,661	-				-0.5
1,962,661	-				+0.5
1,962,663	+				+1.7
1,962,663	+				-0.3
1,962,664	-				+0.6
1,962,664	-				+1.2
1,962,776	-				+0.7
1,962,776	-				+1.1
1,962,776	-				+0.7
1,962,795	-				+1.2
1,962,795	-				+1.2
1,962,869	+				+0.7
1,962,869	+				+0.1
1,962,869	+				+0.1
1,962,870	-				+1.2
1,962,870	-				-1.0
1,962,870	-				-0.5
1,962,870	-				-0.1
1,963,151	+		Pf1N1B4_1715	0.30	+0.7
1,963,151	+		Pf1N1B4_1715	0.30	-0.3
1,963,151	+		Pf1N1B4_1715	0.30	-0.0
1,963,151	+				+2.7
1,963,151	+		Pf1N1B4_1715	0.30	-0.8
1,963,151	+		Pf1N1B4_1715	0.30	+0.7
1,963,151	+		Pf1N1B4_1715	0.30	+0.8
1,963,151	+		Pf1N1B4_1715	0.30	-1.2
1,963,152	-		Pf1N1B4_1715	0.30	+0.4
1,963,152	-		Pf1N1B4_1715	0.30	+0.2
1,963,152	-		Pf1N1B4_1715	0.30	-0.3
1,963,152	-		Pf1N1B4_1715	0.30	-1.8
1,963,152	-		Pf1N1B4_1715	0.30	-0.6
1,963,152	-		Pf1N1B4_1715	0.30	+0.9
1,963,152	-		Pf1N1B4_1715	0.30	-0.2
1,963,152	-		Pf1N1B4_1715	0.30	-0.1
1,963,152	-		Pf1N1B4_1715	0.30	-0.7
1,963,166	+		Pf1N1B4_1715	0.32	+0.2
1,963,166	+		Pf1N1B4_1715	0.32	-1.3
1,963,167	-		Pf1N1B4_1715	0.32	+0.8
1,963,167	-		Pf1N1B4_1715	0.32	-0.1
1,963,167	-		Pf1N1B4_1715	0.32	-0.1
1,963,167	-		Pf1N1B4_1715	0.32	-1.7
1,963,167	-		Pf1N1B4_1715	0.32	-0.7
1,963,185	+				+1.1
1,963,238	+		Pf1N1B4_1715	0.40	+1.2
1,963,238	+		Pf1N1B4_1715	0.40	+0.7
1,963,239	-		Pf1N1B4_1715	0.40	-0.7
1,963,239	-		Pf1N1B4_1715	0.40	-0.3
1,963,239	-		Pf1N1B4_1715	0.40	+1.4
1,963,239	-		Pf1N1B4_1715	0.40	-1.0
1,963,244	+		Pf1N1B4_1715	0.40	+0.2
1,963,244	+		Pf1N1B4_1715	0.40	-0.2
1,963,245	-		Pf1N1B4_1715	0.40	+0.7
1,963,315	+		Pf1N1B4_1715	0.48	+0.1
1,963,315	+		Pf1N1B4_1715	0.48	-0.3
1,963,315	+		Pf1N1B4_1715	0.48	-0.1
1,963,315	+		Pf1N1B4_1715	0.48	+1.1
1,963,315	+		Pf1N1B4_1715	0.48	-0.5
1,963,316	-		Pf1N1B4_1715	0.48	+1.2
1,963,316	-		Pf1N1B4_1715	0.48	-0.7
1,963,316	-		Pf1N1B4_1715	0.48	-0.5
1,963,316	-		Pf1N1B4_1715	0.48	+1.2
1,963,427	+		Pf1N1B4_1715	0.60	-1.3
1,963,428	-		Pf1N1B4_1715	0.60	-0.5
1,963,428	-		Pf1N1B4_1715	0.60	-1.8
1,963,428	-		Pf1N1B4_1715	0.60	+0.9
1,963,487	+		Pf1N1B4_1715	0.66	+0.7
1,963,487	+		Pf1N1B4_1715	0.66	+0.2
1,963,488	-		Pf1N1B4_1715	0.66	+2.5
1,963,488	-		Pf1N1B4_1715	0.66	+0.3
1,963,488	-		Pf1N1B4_1715	0.66	-1.0
1,963,488	-		Pf1N1B4_1715	0.66	+0.8
1,963,526	+		Pf1N1B4_1715	0.71	-0.9
1,963,527	-		Pf1N1B4_1715	0.71	-0.6
1,963,527	-		Pf1N1B4_1715	0.71	-0.2
1,963,527	-		Pf1N1B4_1715	0.71	-1.3