Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1615

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
1,858,563	-		Pf1N1B4_1613	0.51	-1.2
1,858,752	+				-0.4
1,858,783	-				+0.6
1,859,025	+				-0.4
1,859,025	+				-1.0
1,859,025	+				+1.7
1,859,025	+				+1.0
1,859,025	+				-0.4
1,859,026	-				+0.2
1,859,026	-				-0.3
1,859,026	-				+0.4
1,859,026	-				+0.7
1,859,026	-				-0.8
1,859,026	-				+0.1
1,859,026	-				-0.2
1,859,026	-				-0.3
1,859,026	-				-0.8
1,859,026	-				-0.8
1,859,026	-				+1.6
1,859,026	-				+0.1
1,859,045	+		Pf1N1B4_1614	0.11	+0.6
1,859,045	+		Pf1N1B4_1614	0.11	-1.0
1,859,046	-		Pf1N1B4_1614	0.12	-1.3
1,859,046	-		Pf1N1B4_1614	0.12	-0.4
1,859,046	-		Pf1N1B4_1614	0.12	-0.8
1,859,405	+				+3.1
1,859,406	-		Pf1N1B4_1614	0.86	-0.4
1,859,406	-		Pf1N1B4_1614	0.86	-0.8
1,859,406	-		Pf1N1B4_1614	0.86	+2.1
1,859,406	-		Pf1N1B4_1614	0.86	-0.8
1,859,406	-		Pf1N1B4_1614	0.86	-1.4
1,859,406	-		Pf1N1B4_1614	0.86	+1.1
1,859,503	-				-0.4
1,859,504	+				-0.8
1,859,504	+				-1.1
1,859,504	+				+0.3
1,859,504	+				-0.8
1,859,505	-				+0.2
1,859,505	-				-0.2
1,859,505	-				-0.2
1,859,505	-				+0.1
1,859,505	-				+1.0
1,859,505	-				-0.2
1,859,505	-				+0.8
1,859,505	-				+0.6
1,859,514	+				+1.0
1,859,515	-				-1.1
1,859,515	-				+0.2
1,859,523	+				+1.6
1,859,523	+				+1.0
1,859,523	+				-1.6
1,859,524	-				+0.3
1,859,635	+		Pf1N1B4_1615	0.41	-0.4
1,859,635	+		Pf1N1B4_1615	0.41	-0.4
1,859,636	-		Pf1N1B4_1615	0.41	-0.8
1,859,636	-		Pf1N1B4_1615	0.41	+0.6
1,859,636	-		Pf1N1B4_1615	0.41	-1.0
1,859,728	-		Pf1N1B4_1615	0.77	-0.0
1,859,728	-		Pf1N1B4_1615	0.77	-0.3
1,859,728	-		Pf1N1B4_1615	0.77	-1.6
1,859,767	-				-0.8
1,859,767	-				-0.4
1,859,785	+				-0.2
1,860,222	-				-1.0
1,860,237	-				-2.1
1,860,239	-				+1.6
1,860,239	-				-0.0
1,860,239	-				+0.1
1,860,239	-				+0.7
1,860,239	-				-0.4
1,860,239	-				-0.6
1,860,239	-				-1.6
1,860,239	-				+0.8
1,860,239	-				-0.2
1,860,239	-				+1.1
1,860,249	+				-0.4
1,860,250	-				-0.9
1,860,292	+				-1.8
1,860,292	+				-0.0
1,860,292	+				-1.2
1,860,293	-				-1.6
1,860,293	-				+0.6
1,860,293	-				-0.2
1,860,293	-				-0.9
1,860,293	-				-0.9
1,860,293	-				+1.1
1,860,293	-				-0.6
1,860,293	-				+0.4
1,860,293	-				+1.4
1,860,293	-				-1.8
1,860,293	-				-1.2
1,860,293	-				+0.9
1,860,299	-				-1.2
1,860,299	-				+0.8
1,860,299	-				-1.6
1,860,307	-				+1.1
1,860,307	-				-0.9
1,860,307	-				-0.8
1,860,330	+				-1.4
1,860,330	+				+0.6
1,860,331	-				+1.0
1,860,331	-				+0.8
1,860,358	+				-0.9
1,860,359	-				-0.8
1,860,434	+				-0.8
1,860,434	+				-0.8
1,860,434	+				+0.1
1,860,435	-				+1.0
1,860,435	-				-1.3
1,860,435	-				-0.0
1,860,435	-				+1.0
1,860,435	-				-2.9
1,860,435	-				-1.4
1,860,435	-				+0.6
1,860,435	-				-0.3
1,860,584	+		Pf1N1B4_1617	0.15	-2.6
1,860,768	-		Pf1N1B4_1617	0.27	-0.2
1,860,768	-		Pf1N1B4_1617	0.27	+0.7
1,860,768	-		Pf1N1B4_1617	0.27	+0.1
1,860,768	-		Pf1N1B4_1617	0.27	-1.5