Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1610

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
1,853,782	+				-0.0
1,853,783	-		Pf1N1B4_1609	0.10	-0.0
1,853,783	-		Pf1N1B4_1609	0.10	-1.3
1,853,786	+		Pf1N1B4_1609	0.10	-0.0
1,853,786	+		Pf1N1B4_1609	0.10	-1.2
1,853,786	+		Pf1N1B4_1609	0.10	+2.0
1,853,787	-		Pf1N1B4_1609	0.11	-0.8
1,853,787	-		Pf1N1B4_1609	0.11	-1.2
1,853,787	-		Pf1N1B4_1609	0.11	+0.5
1,853,787	-		Pf1N1B4_1609	0.11	+1.0
1,853,787	-		Pf1N1B4_1609	0.11	-1.6
1,853,836	+		Pf1N1B4_1609	0.19	-2.4
1,853,983	+				-0.0
1,854,341	-				+0.6
1,854,348	-				+0.1
1,854,348	-				+1.1
1,854,348	-				-0.0
1,854,348	-				+1.0
1,854,348	-				+1.5
1,854,348	-				+1.7
1,854,348	-				+0.2
1,854,348	-				+3.1
1,854,348	-				-2.9
1,854,348	-				-0.0
1,854,348	-				-0.0
1,854,481	+				+1.5
1,854,482	-				+0.7
1,854,531	+				-0.0
1,854,532	-				+1.0
1,854,534	-				-1.5
1,854,534	-				+1.3
1,854,544	+				+1.1
1,854,557	-				-0.0
1,854,557	-				-0.5
1,854,589	-				+1.0
1,854,589	-				+2.0
1,854,589	-				+0.1
1,854,589	-				+1.2
1,854,648	-				-0.5
1,854,761	-				+0.4
1,854,761	-				-0.2
1,854,761	-				+0.2
1,854,761	-				-0.0
1,854,761	-				+0.5
1,854,772	+				-1.3
1,854,773	-				-1.5
1,854,773	-				+0.5
1,854,773	-				-0.8
1,854,773	-				+0.6
1,854,828	+				+0.5
1,854,829	-				+0.5
1,854,829	-				-0.6
1,854,829	-				+1.5
1,854,829	-				+1.0
1,854,829	-				+1.1
1,854,829	-				-1.6
1,854,829	-				+1.5
1,854,829	-				-0.8
1,854,829	-				-2.4
1,854,829	-				-0.0
1,854,829	-				+0.4
1,854,829	-				-2.0
1,854,875	+		Pf1N1B4_1610	0.12	-0.5
1,855,020	+		Pf1N1B4_1610	0.26	+1.0
1,855,021	-		Pf1N1B4_1610	0.26	-3.0
1,855,021	-		Pf1N1B4_1610	0.26	-0.5
1,855,053	-		Pf1N1B4_1610	0.29	-2.0
1,855,248	+		Pf1N1B4_1610	0.47	-1.8
1,855,367	-		Pf1N1B4_1610	0.58	-1.5
1,855,367	-		Pf1N1B4_1610	0.58	-0.5
1,855,367	-		Pf1N1B4_1610	0.58	-0.0
1,855,419	+		Pf1N1B4_1610	0.62	-1.6
1,855,867	+				-0.8
1,855,868	-				+0.4
1,855,868	-				-2.2
1,855,868	-				+0.5
1,856,106	-		Pf1N1B4_1611	0.20	-0.5
1,856,126	+		Pf1N1B4_1611	0.21	-2.2
1,856,126	+		Pf1N1B4_1611	0.21	-1.6
1,856,127	-		Pf1N1B4_1611	0.21	-0.6
1,856,127	-		Pf1N1B4_1611	0.21	-1.0
1,856,233	+				-0.0
1,856,609	+		Pf1N1B4_1611	0.55	-1.0
1,856,609	+		Pf1N1B4_1611	0.55	-0.9
1,856,610	-		Pf1N1B4_1611	0.55	-1.2
1,856,610	-		Pf1N1B4_1611	0.55	+1.0