Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1573

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
1,810,501	+		Pf1N1B4_1572	0.62	-1.9
1,810,508	+		Pf1N1B4_1572	0.62	-0.5
1,810,509	-		Pf1N1B4_1572	0.62	+1.5
1,810,530	+		Pf1N1B4_1572	0.63	+0.5
1,810,794	+		Pf1N1B4_1572	0.73	-2.3
1,810,794	+		Pf1N1B4_1572	0.73	-0.5
1,810,882	+		Pf1N1B4_1572	0.77	-1.8
1,810,883	-		Pf1N1B4_1572	0.77	-0.5
1,810,883	-		Pf1N1B4_1572	0.77	-1.8
1,810,909	-		Pf1N1B4_1572	0.78	-0.1
1,810,909	-		Pf1N1B4_1572	0.78	+0.5
1,810,909	-		Pf1N1B4_1572	0.78	+0.8
1,811,007	+		Pf1N1B4_1572	0.81	-0.1
1,811,007	+		Pf1N1B4_1572	0.81	-1.1
1,811,007	+		Pf1N1B4_1572	0.81	+0.5
1,811,008	-		Pf1N1B4_1572	0.82	-0.7
1,811,055	+		Pf1N1B4_1572	0.83	+0.3
1,811,465	+				-0.1
1,811,465	+				-0.5
1,811,465	+				+0.9
1,811,465	+				+3.3
1,811,465	+				+1.0
1,811,477	-				+0.3
1,811,477	-				+3.5
1,811,498	-				-1.1
1,811,498	-				-0.7
1,811,956	+		Pf1N1B4_1573	0.27	-1.5
1,811,957	-		Pf1N1B4_1573	0.27	-1.5
1,811,957	-		Pf1N1B4_1573	0.27	+0.9
1,812,149	+		Pf1N1B4_1573	0.38	-0.2
1,812,150	-		Pf1N1B4_1573	0.38	-1.9
1,812,271	+		Pf1N1B4_1573	0.45	-1.1
1,812,272	-		Pf1N1B4_1573	0.45	+1.5
1,812,437	-		Pf1N1B4_1573	0.54	-0.9
1,812,570	+		Pf1N1B4_1573	0.62	+1.5
1,812,571	-		Pf1N1B4_1573	0.62	-0.8
1,812,571	-		Pf1N1B4_1573	0.62	-0.1
1,812,571	-		Pf1N1B4_1573	0.62	-0.5
1,812,571	-		Pf1N1B4_1573	0.62	-0.1
1,812,571	-		Pf1N1B4_1573	0.62	-0.8
1,812,769	+		Pf1N1B4_1573	0.73	-0.5
1,812,769	+		Pf1N1B4_1573	0.73	+0.6
1,812,769	+		Pf1N1B4_1573	0.73	+0.5
1,812,770	-		Pf1N1B4_1573	0.73	+1.5
1,812,869	+		Pf1N1B4_1573	0.78	-1.3
1,812,870	-		Pf1N1B4_1573	0.79	-0.1
1,812,870	-		Pf1N1B4_1573	0.79	-0.5
1,812,914	-		Pf1N1B4_1573	0.81	-0.3
1,813,218	+				+2.3
1,813,263	-				-0.1
1,813,449	+				-0.5
1,813,450	-				+0.4
1,813,453	+				+1.1
1,813,453	+				-0.9
1,813,454	-				+1.1
1,813,454	-				-0.8
1,813,454	-				+0.7
1,813,454	-				+2.3
1,813,454	-				+0.5
1,813,454	-				-0.3
1,813,498	+				+1.5
1,813,502	+				-0.8
1,813,503	-				+0.5
1,813,503	-				-0.4
1,813,515	+				+0.3
1,813,540	-				+1.5
1,813,540	-				+0.3
1,813,540	-				+1.0
1,813,581	-				+0.6
1,813,581	-				+0.1
1,813,655	+		Pf1N1B4_1574	0.14	-1.7
1,813,671	-		Pf1N1B4_1574	0.18	-0.8
1,813,706	+		Pf1N1B4_1574	0.27	+0.4
1,813,706	+		Pf1N1B4_1574	0.27	-2.1
1,813,713	+		Pf1N1B4_1574	0.29	+1.3
1,813,713	+		Pf1N1B4_1574	0.29	-0.1
1,813,714	-				-0.1
1,813,714	-				+0.5
1,813,714	-		Pf1N1B4_1574	0.29	+1.2
1,813,714	-				+1.5
1,813,714	-		Pf1N1B4_1574	0.29	+0.9
1,813,714	-		Pf1N1B4_1574	0.29	-0.8
1,813,714	-		Pf1N1B4_1574	0.29	+0.2
1,813,834	-		Pf1N1B4_1574	0.60	-1.1
1,813,889	+		Pf1N1B4_1574	0.75	-0.1
1,813,889	+		Pf1N1B4_1574	0.75	-0.1
1,813,890	-		Pf1N1B4_1574	0.75	+0.3
1,813,890	-		Pf1N1B4_1574	0.75	-0.5
1,813,890	-		Pf1N1B4_1574	0.75	-0.4
1,813,890	-		Pf1N1B4_1574	0.75	+0.5
1,813,898	+		Pf1N1B4_1574	0.77	-1.9
1,813,898	+		Pf1N1B4_1574	0.77	-1.8
1,813,972	-				-1.1
1,813,972	-				+0.4
1,813,972	-				-0.2
1,813,972	-				+1.5
1,814,025	+				-1.7
1,814,025	+				+0.2
1,814,025	+				+0.9
1,814,026	-				-0.1
1,814,108	-				+0.5
1,814,108	-				-0.5
1,814,110	+				-0.8
1,814,110	+				+0.3
1,814,110	+				+1.2
1,814,110	+				+2.4
1,814,110	+				+0.5
1,814,111	-				+0.6
1,814,111	-				-0.8
1,814,111	-				-0.2
1,814,111	-				+0.9
1,814,111	-				+0.9
1,814,111	-				+1.5