Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1430

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
1,637,160	+				-1.7
1,637,160	+				+2.0
1,637,161	-				-1.1
1,637,324	+		Pf1N1B4_1429	0.24	-0.9
1,637,349	+		Pf1N1B4_1429	0.27	+2.0
1,637,349	+		Pf1N1B4_1429	0.27	+0.6
1,637,350	-		Pf1N1B4_1429	0.27	+1.1
1,637,350	-		Pf1N1B4_1429	0.27	+1.2
1,637,354	-		Pf1N1B4_1429	0.27	+1.2
1,637,354	-		Pf1N1B4_1429	0.27	+2.3
1,637,354	-		Pf1N1B4_1429	0.27	-0.1
1,637,354	-		Pf1N1B4_1429	0.27	-0.2
1,637,368	+		Pf1N1B4_1429	0.29	+1.0
1,637,368	+				+0.4
1,637,368	+		Pf1N1B4_1429	0.29	+0.4
1,637,368	+		Pf1N1B4_1429	0.29	-0.0
1,637,368	+		Pf1N1B4_1429	0.29	-0.9
1,637,369	-		Pf1N1B4_1429	0.29	+1.1
1,637,369	-		Pf1N1B4_1429	0.29	+1.3
1,637,369	-		Pf1N1B4_1429	0.29	-0.3
1,637,423	-		Pf1N1B4_1429	0.35	+0.6
1,637,591	+		Pf1N1B4_1429	0.55	+2.4
1,637,603	+		Pf1N1B4_1429	0.56	-0.1
1,637,604	-		Pf1N1B4_1429	0.57	-1.4
1,637,604	-		Pf1N1B4_1429	0.57	-0.7
1,637,604	-		Pf1N1B4_1429	0.57	+0.1
1,637,604	-		Pf1N1B4_1429	0.57	-0.6
1,637,604	-		Pf1N1B4_1429	0.57	+0.9
1,637,604	-		Pf1N1B4_1429	0.57	-1.6
1,637,604	-		Pf1N1B4_1429	0.57	+0.2
1,637,604	-		Pf1N1B4_1429	0.57	-0.9
1,637,639	+		Pf1N1B4_1429	0.61	+0.3
1,637,718	+		Pf1N1B4_1429	0.70	+0.7
1,637,730	-		Pf1N1B4_1429	0.71	-0.6
1,637,753	+		Pf1N1B4_1429	0.74	+0.6
1,637,753	+		Pf1N1B4_1429	0.74	+1.2
1,637,753	+		Pf1N1B4_1429	0.74	+0.4
1,637,754	-		Pf1N1B4_1429	0.74	+1.4
1,637,754	-		Pf1N1B4_1429	0.74	-0.1
1,637,754	-		Pf1N1B4_1429	0.74	-0.8
1,637,817	+		Pf1N1B4_1429	0.82	+1.1
1,637,818	-		Pf1N1B4_1429	0.82	+0.9
1,637,818	-		Pf1N1B4_1429	0.82	+0.9
1,637,818	-		Pf1N1B4_1429	0.82	+0.8
1,637,921	+				-1.7
1,637,921	+				+0.2
1,637,945	-				-0.5
1,637,968	-				-0.0
1,637,973	+				+3.0
1,637,973	+				-1.7
1,637,974	-				+1.4
1,637,974	-				-0.6
1,637,974	-				-1.9
1,637,974	-				+1.0
1,637,974	-				-1.4
1,637,977	+				+0.7
1,637,977	+				-0.9
1,637,978	-				+0.1
1,637,978	-				+2.6
1,637,978	-				+1.4
1,637,978	-				-0.1
1,637,978	-				-0.2
1,637,989	+				-0.4
1,637,989	+				+0.2
1,637,990	-				+0.7
1,637,990	-				+1.7
1,638,012	-				-0.9
1,638,022	+				-0.7
1,638,065	+				-1.7
1,638,065	+				-0.1
1,638,065	+				+0.6
1,638,065	+				-1.4
1,638,066	-				-0.4
1,638,066	-				+1.4
1,638,066	-				+0.7
1,638,108	+				-0.3
1,638,108	+				-0.6
1,638,108	+				+0.5
1,638,109	-				-1.6
1,638,109	-				-1.2
1,638,109	-				+0.4
1,638,112	+				-0.6
1,638,113	-				+0.5
1,638,113	-				-0.3
1,638,113	-				+1.9
1,638,113	-				+0.1
1,638,392	+		Pf1N1B4_1430	0.17	+0.2
1,638,393	-		Pf1N1B4_1430	0.17	-0.6
1,638,393	-		Pf1N1B4_1430	0.17	-1.4
1,639,184	+		Pf1N1B4_1430	0.69	+0.6
1,639,184	+		Pf1N1B4_1430	0.69	-1.6
1,639,223	+		Pf1N1B4_1430	0.71	-0.1
1,639,223	+		Pf1N1B4_1430	0.71	-0.7
1,639,667	+				+0.6
1,639,668	-				+0.3
1,639,668	-				-1.7
1,639,688	+				+0.8
1,639,689	-				+0.9
1,639,689	-				+1.0
1,639,727	+				+0.0
1,639,727	+				+1.0
1,639,728	-				-1.7
1,639,796	+				+0.7
1,639,803	+				+2.4
1,639,803	+				+1.4
1,639,805	+				+0.8
1,639,824	-				-1.1
1,639,872	+				-1.4
1,639,901	+				+2.4
1,639,932	+				-0.6
1,639,932	+				+0.6
1,639,932	+				-0.1
1,639,933	-				-0.9
1,639,933	-				+0.3
1,639,933	-				-0.3
1,640,085	+		Pf1N1B4_1431	0.15	-0.1
1,640,215	+		Pf1N1B4_1431	0.31	+0.1
1,640,215	+		Pf1N1B4_1431	0.31	-0.1
1,640,215	+		Pf1N1B4_1431	0.31	+0.7
1,640,215	+		Pf1N1B4_1431	0.31	+1.1
1,640,215	+		Pf1N1B4_1431	0.31	+1.9
1,640,215	+		Pf1N1B4_1431	0.31	+1.3
1,640,215	+		Pf1N1B4_1431	0.31	+0.1
1,640,215	+		Pf1N1B4_1431	0.31	+1.0
1,640,224	+		Pf1N1B4_1431	0.32	-0.1
1,640,224	+		Pf1N1B4_1431	0.32	+0.8
1,640,224	+		Pf1N1B4_1431	0.32	+1.0
1,640,224	+		Pf1N1B4_1431	0.32	+0.4
1,640,259	+		Pf1N1B4_1431	0.36	+0.6
1,640,293	+		Pf1N1B4_1431	0.40	+0.4
1,640,293	+		Pf1N1B4_1431	0.40	-0.6
1,640,293	+		Pf1N1B4_1431	0.40	+0.9
1,640,293	+		Pf1N1B4_1431	0.40	+0.2
1,640,293	+		Pf1N1B4_1431	0.40	+0.7
1,640,293	+		Pf1N1B4_1431	0.40	+1.6
1,640,293	+		Pf1N1B4_1431	0.40	-0.6
1,640,293	+		Pf1N1B4_1431	0.40	+1.6
1,640,293	+		Pf1N1B4_1431	0.40	-0.3
1,640,293	+		Pf1N1B4_1431	0.40	-1.6
1,640,293	+		Pf1N1B4_1431	0.40	+1.1
1,640,293	+		Pf1N1B4_1431	0.40	+1.6
1,640,293	+		Pf1N1B4_1431	0.40	+1.0
1,640,293	+		Pf1N1B4_1431	0.40	-0.0
1,640,293	+		Pf1N1B4_1431	0.40	+0.7
1,640,293	+		Pf1N1B4_1431	0.40	+1.4
1,640,293	+		Pf1N1B4_1431	0.40	+2.0
1,640,293	+		Pf1N1B4_1431	0.40	+0.4
1,640,293	+		Pf1N1B4_1431	0.40	+2.9
1,640,293	+		Pf1N1B4_1431	0.40	+0.4
1,640,299	+		Pf1N1B4_1431	0.41	+2.4
1,640,299	+		Pf1N1B4_1431	0.41	-0.6
1,640,299	+		Pf1N1B4_1431	0.41	+0.4
1,640,299	+		Pf1N1B4_1431	0.41	+0.6
1,640,299	+		Pf1N1B4_1431	0.41	+0.4
1,640,299	+		Pf1N1B4_1431	0.41	+0.2
1,640,299	+		Pf1N1B4_1431	0.41	+0.2
1,640,299	+		Pf1N1B4_1431	0.41	-0.1
1,640,299	+		Pf1N1B4_1431	0.41	+0.7
1,640,299	+		Pf1N1B4_1431	0.41	-0.6
1,640,299	+		Pf1N1B4_1431	0.41	+0.1
1,640,299	+		Pf1N1B4_1431	0.41	+1.5
1,640,299	+		Pf1N1B4_1431	0.41	+0.2
1,640,299	+		Pf1N1B4_1431	0.41	+0.2
1,640,301	+		Pf1N1B4_1431	0.41	+0.3
1,640,422	+		Pf1N1B4_1431	0.56	+1.1
1,640,422	+		Pf1N1B4_1431	0.56	+1.4
1,640,485	+		Pf1N1B4_1431	0.64	-0.1
1,640,485	+		Pf1N1B4_1431	0.64	-0.1