Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1090

Experiment: Sisomicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.001 mg/ml
1,219,100	+				-0.7
1,219,100	+				-0.7
1,219,100	+				-0.1
1,219,100	+				+0.3
1,219,101	-				-0.8
1,219,101	-				+1.3
1,219,101	-				-0.6
1,219,101	-				+1.2
1,219,101	-				-0.0
1,219,101	-				+0.5
1,219,101	-				-0.0
1,219,135	+				+0.3
1,219,164	+				+0.1
1,219,164	+				-0.7
1,219,164	+				+0.3
1,219,164	+				+0.9
1,219,164	+				+1.3
1,219,164	+				-0.5
1,219,164	+				+1.3
1,219,164	+				+0.3
1,219,213	+				-0.3
1,219,501	+				+0.8
1,219,501	+				-0.5
1,219,502	-				+0.7
1,219,640	+				+1.3
1,219,641	-				-1.7
1,219,721	-				+1.1
1,219,778	+				-1.0
1,219,778	+				+2.0
1,219,778	+				+1.3
1,219,778	+				+1.9
1,219,779	-				-2.2
1,219,779	-				-0.5
1,219,779	-				-1.3
1,219,779	-				-0.1
1,219,779	-				-1.5
1,219,783	-				+0.3
1,219,828	-				-0.9
1,219,828	-				+0.9
1,219,851	+				+0.3
1,219,899	+				-1.1
1,219,967	+		Pf1N1B4_1090	0.14	+0.7
1,220,135	+		Pf1N1B4_1090	0.27	-0.0
1,220,136	-		Pf1N1B4_1090	0.27	-1.0
1,220,136	-		Pf1N1B4_1090	0.27	+1.6
1,220,146	+		Pf1N1B4_1090	0.27	-0.4
1,220,146	+		Pf1N1B4_1090	0.27	-2.7
1,220,147	-		Pf1N1B4_1090	0.27	-0.1
1,220,147	-		Pf1N1B4_1090	0.27	-1.2
1,220,147	-		Pf1N1B4_1090	0.27	-1.7
1,220,150	+		Pf1N1B4_1090	0.28	+1.8
1,220,150	+		Pf1N1B4_1090	0.28	+0.6
1,220,150	+		Pf1N1B4_1090	0.28	-1.3
1,220,150	+		Pf1N1B4_1090	0.28	+0.9
1,220,151	-		Pf1N1B4_1090	0.28	-1.9
1,220,151	-		Pf1N1B4_1090	0.28	-1.0
1,220,151	-		Pf1N1B4_1090	0.28	-0.0
1,220,151	-		Pf1N1B4_1090	0.28	+0.9
1,220,151	-		Pf1N1B4_1090	0.28	-0.7
1,220,189	+		Pf1N1B4_1090	0.31	-0.5
1,220,190	-		Pf1N1B4_1090	0.31	+0.5
1,220,190	-		Pf1N1B4_1090	0.31	-0.3
1,220,190	-		Pf1N1B4_1090	0.31	-1.0
1,220,510	+		Pf1N1B4_1090	0.54	-1.5
1,220,511	-		Pf1N1B4_1090	0.54	-2.4
1,220,517	-		Pf1N1B4_1090	0.55	-1.0
1,220,596	-		Pf1N1B4_1090	0.61	+1.5
1,220,914	+		Pf1N1B4_1090	0.84	+0.5
1,220,915	-		Pf1N1B4_1090	0.84	-1.3
1,220,918	+		Pf1N1B4_1090	0.85	+1.0
1,220,918	+		Pf1N1B4_1090	0.85	-0.7
1,220,918	+		Pf1N1B4_1090	0.85	-1.7
1,220,919	-		Pf1N1B4_1090	0.85	+1.3
1,220,919	-		Pf1N1B4_1090	0.85	-1.5
1,220,919	-				+1.9
1,220,919	-		Pf1N1B4_1090	0.85	-1.3
1,220,919	-		Pf1N1B4_1090	0.85	-2.1
1,220,919	-		Pf1N1B4_1090	0.85	-1.3
1,220,919	-		Pf1N1B4_1090	0.85	+1.3
1,220,919	-		Pf1N1B4_1090	0.85	+0.3
1,220,919	-		Pf1N1B4_1090	0.85	-2.5
1,220,919	-		Pf1N1B4_1090	0.85	-0.4
1,221,331	+		Pf1N1B4_1091	0.19	+1.6
1,221,331	+				-1.5
1,221,331	+				+1.3
1,221,331	+		Pf1N1B4_1091	0.19	-0.0
1,221,331	+		Pf1N1B4_1091	0.19	+0.3
1,221,380	-		Pf1N1B4_1091	0.28	-0.6
1,221,380	-		Pf1N1B4_1091	0.28	+0.8
1,221,421	+		Pf1N1B4_1091	0.36	-0.5
1,221,442	+		Pf1N1B4_1091	0.40	-0.0
1,221,442	+		Pf1N1B4_1091	0.40	-0.7
1,221,442	+		Pf1N1B4_1091	0.40	-0.6
1,221,442	+		Pf1N1B4_1091	0.40	-2.4
1,221,442	+		Pf1N1B4_1091	0.40	-1.3
1,221,442	+				-0.3
1,221,442	+		Pf1N1B4_1091	0.40	-1.0
1,221,442	+		Pf1N1B4_1091	0.40	-0.1
1,221,442	+		Pf1N1B4_1091	0.40	-0.3
1,221,442	+		Pf1N1B4_1091	0.40	-1.0
1,221,442	+		Pf1N1B4_1091	0.40	+0.1
1,221,442	+		Pf1N1B4_1091	0.40	+0.8
1,221,442	+		Pf1N1B4_1091	0.40	+0.3
1,221,443	-		Pf1N1B4_1091	0.40	+1.1
1,221,443	-		Pf1N1B4_1091	0.40	+0.7
1,221,443	-		Pf1N1B4_1091	0.40	-0.3
1,221,443	-		Pf1N1B4_1091	0.40	+0.0
1,221,527	+		Pf1N1B4_1091	0.56	-1.0
1,221,527	+		Pf1N1B4_1091	0.56	-1.0
1,221,528	-		Pf1N1B4_1091	0.56	+1.2
1,221,716	+				+0.3
1,221,716	+				-0.6
1,221,717	-				+1.3
1,221,717	-				+0.5
1,221,717	-				+0.8
1,221,717	-				+0.5
1,221,717	-				-1.3
1,221,717	-				+0.6
1,221,808	-				-0.2
1,221,829	+				+1.5
1,221,830	-				-1.3
1,222,023	+		Pf1N1B4_1092	0.15	+1.3
1,222,095	+		Pf1N1B4_1092	0.20	-1.5
1,222,095	+		Pf1N1B4_1092	0.20	-0.3
1,222,095	+		Pf1N1B4_1092	0.20	-1.3
1,222,095	+		Pf1N1B4_1092	0.20	-0.2
1,222,095	+		Pf1N1B4_1092	0.20	+0.4
1,222,096	-		Pf1N1B4_1092	0.20	-2.1
1,222,096	-		Pf1N1B4_1092	0.20	-0.7