Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS19830

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
4,487,928	-		PFLU_RS19825	0.76	+0.8
4,487,928	-		PFLU_RS19825	0.76	+2.1
4,487,928	-		PFLU_RS19825	0.76	+0.6
4,487,928	-		PFLU_RS19825	0.76	-1.1
4,487,988	+		PFLU_RS19825	0.80	+0.1
4,487,989	-		PFLU_RS19825	0.80	+0.6
4,488,010	+		PFLU_RS19825	0.82	-2.0
4,488,010	+		PFLU_RS19825	0.82	+0.3
4,488,010	+		PFLU_RS19825	0.82	+1.1
4,488,011	-		PFLU_RS19825	0.82	-1.4
4,488,011	-		PFLU_RS19825	0.82	+0.9
4,488,011	-		PFLU_RS19825	0.82	-1.4
4,488,018	-		PFLU_RS19825	0.82	+0.9
4,488,062	+		PFLU_RS19825	0.85	-1.0
4,488,063	-		PFLU_RS19825	0.85	+0.6
4,488,063	-		PFLU_RS19825	0.85	-1.9
4,488,124	+		PFLU_RS19825	0.89	-2.4
4,488,125	-		PFLU_RS19825	0.90	-0.4
4,488,125	-		PFLU_RS19825	0.90	-2.2
4,488,126	+		PFLU_RS19825	0.90	+1.5
4,488,188	+				-0.2
4,488,239	+				-1.1
4,488,239	+				-1.2
4,488,239	+				-1.7
4,488,239	+				+0.1
4,488,240	-				-1.2
4,488,240	-				+0.7
4,488,250	+				+0.2
4,488,290	+				-0.2
4,488,290	+				+1.0
4,488,290	+				+0.5
4,488,290	+				-1.8
4,488,291	-				-0.1
4,488,291	-				-0.4
4,488,291	-				+0.4
4,488,291	-				-1.6
4,488,335	+				+2.0
4,488,335	+				-1.8
4,488,335	+				-0.8
4,488,335	+				+0.8
4,488,335	+				-1.3
4,488,335	+				-0.4
4,488,335	+				+0.2
4,488,336	-				-1.8
4,488,336	-				-0.1
4,488,336	-				+0.6
4,488,336	-				-0.1
4,488,336	-				+0.9
4,488,336	-				-0.2
4,488,336	-				-0.2
4,488,336	-				+1.7
4,488,344	+				-2.5
4,488,344	+				-1.5
4,488,368	+				+0.9
4,488,369	-				-0.8
4,488,369	-				+1.8
4,488,369	-				-1.4
4,488,372	+				+1.0
4,488,372	+				+0.8
4,488,372	+				+1.6
4,488,373	-				-1.2
4,488,383	+				-1.8
4,488,475	+				-1.8
4,488,490	+				-0.9
4,488,493	+				-1.7
4,488,493	+				-0.6
4,488,494	-				+1.0
4,488,494	-				+0.6
4,488,494	-				-0.6
4,488,494	-				-1.3
4,488,494	-				-0.6
4,488,494	-				+0.5
4,488,574	+		PFLU_RS19830	0.17	+0.9
4,488,574	+		PFLU_RS19830	0.17	+0.8
4,488,575	-		PFLU_RS19830	0.17	-0.6
4,488,575	-		PFLU_RS19830	0.17	-0.6
4,488,575	-		PFLU_RS19830	0.17	-1.4
4,488,616	+		PFLU_RS19830	0.25	-0.1
4,488,632	+		PFLU_RS19830	0.29	+0.4
4,488,691	+		PFLU_RS19830	0.41	-0.5
4,488,792	-		PFLU_RS19830	0.61	+0.4
4,488,968	+				+1.0
4,488,968	+				+1.4
4,488,968	+				+1.5
4,488,969	-				+0.2
4,489,110	+				+1.2
4,489,111	-				+1.1
4,489,132	-				-0.9
4,489,162	+				+0.5
4,489,162	+				-1.6
4,489,163	-				-0.6
4,489,186	-				+1.2
4,489,306	+		PFLU_RS19835	0.15	+0.1
4,489,306	+		PFLU_RS19835	0.15	-0.4
4,489,306	+		PFLU_RS19835	0.15	-0.6
4,489,306	+		PFLU_RS19835	0.15	-1.1
4,489,306	+		PFLU_RS19835	0.15	+0.9
4,489,306	+		PFLU_RS19835	0.15	-0.3
4,489,307	-		PFLU_RS19835	0.15	-1.3
4,489,307	-		PFLU_RS19835	0.15	-2.1
4,489,307	-		PFLU_RS19835	0.15	-1.7
4,489,307	-		PFLU_RS19835	0.15	-1.4
4,489,364	+		PFLU_RS19835	0.21	-0.6
4,489,364	+		PFLU_RS19835	0.21	+0.7
4,489,364	+		PFLU_RS19835	0.21	+0.5
4,489,365	-		PFLU_RS19835	0.22	-0.4
4,489,365	-		PFLU_RS19835	0.22	+1.8
4,489,402	+		PFLU_RS19835	0.26	+0.3
4,489,403	-		PFLU_RS19835	0.26	+0.7
4,489,524	+		PFLU_RS19835	0.39	-1.8
4,489,524	+		PFLU_RS19835	0.39	+1.1
4,489,551	+		PFLU_RS19835	0.42	-1.6
4,489,620	+		PFLU_RS19835	0.49	-1.8
4,489,620	+		PFLU_RS19835	0.49	-0.8
4,489,620	+		PFLU_RS19835	0.49	+0.2
4,489,621	-		PFLU_RS19835	0.50	+0.2
4,489,621	-		PFLU_RS19835	0.50	+1.0
4,489,621	-		PFLU_RS19835	0.50	+0.1
4,489,621	-		PFLU_RS19835	0.50	-0.3
4,489,675	+		PFLU_RS19835	0.55	-0.6
4,489,676	-		PFLU_RS19835	0.56	+2.9
4,489,676	-		PFLU_RS19835	0.56	+0.3
4,489,679	+		PFLU_RS19835	0.56	+1.7
4,489,679	+		PFLU_RS19835	0.56	+0.1
4,489,679	+		PFLU_RS19835	0.56	+1.5
4,489,679	+		PFLU_RS19835	0.56	-2.0
4,489,679	+		PFLU_RS19835	0.56	-1.6
4,489,680	-		PFLU_RS19835	0.56	-2.6
4,489,680	-		PFLU_RS19835	0.56	-0.8
4,489,680	-		PFLU_RS19835	0.56	-0.1
4,489,680	-		PFLU_RS19835	0.56	+0.1
4,489,680	-		PFLU_RS19835	0.56	-0.1
4,489,680	-		PFLU_RS19835	0.56	-1.9
4,489,680	-		PFLU_RS19835	0.56	-1.0
4,489,680	-		PFLU_RS19835	0.56	-0.4
4,489,684	-		PFLU_RS19835	0.56	-1.1
4,489,733	+		PFLU_RS19835	0.62	-0.3
4,489,752	+		PFLU_RS19835	0.64	+1.4
4,489,752	+		PFLU_RS19835	0.64	-0.0
4,489,752	+		PFLU_RS19835	0.64	-0.4
4,489,752	+		PFLU_RS19835	0.64	-0.5
4,489,752	+		PFLU_RS19835	0.64	+0.4
4,489,752	+		PFLU_RS19835	0.64	+0.8
4,489,752	+		PFLU_RS19835	0.64	-1.0
4,489,752	+		PFLU_RS19835	0.64	+0.9
4,489,752	+		PFLU_RS19835	0.64	-0.2
4,489,752	+		PFLU_RS19835	0.64	+1.7
4,489,752	+		PFLU_RS19835	0.64	-0.8
4,489,753	-		PFLU_RS19835	0.64	+0.4
4,489,753	-		PFLU_RS19835	0.64	+0.9
4,489,753	-		PFLU_RS19835	0.64	+0.9
4,489,753	-		PFLU_RS19835	0.64	-1.4
4,489,753	-		PFLU_RS19835	0.64	-0.6
4,489,753	-		PFLU_RS19835	0.64	+0.9
4,489,753	-		PFLU_RS19835	0.64	-0.4
4,489,753	-		PFLU_RS19835	0.64	+0.5
4,489,779	+		PFLU_RS19835	0.67	-2.0
4,489,779	+		PFLU_RS19835	0.67	+0.7
4,489,779	+		PFLU_RS19835	0.67	-0.1
4,489,779	+		PFLU_RS19835	0.67	+1.2
4,489,779	+		PFLU_RS19835	0.67	+0.7
4,489,779	+		PFLU_RS19835	0.67	-0.1
4,489,780	-		PFLU_RS19835	0.67	+1.4
4,489,815	-		PFLU_RS19835	0.71	+0.4
4,489,815	-		PFLU_RS19835	0.71	+0.7
4,489,869	+		PFLU_RS19835	0.77	-1.0
4,489,869	+		PFLU_RS19835	0.77	-0.2
4,489,869	+		PFLU_RS19835	0.77	-0.2
4,489,869	+		PFLU_RS19835	0.77	+0.6
4,489,869	+		PFLU_RS19835	0.77	-1.8
4,489,870	-		PFLU_RS19835	0.77	-1.3
4,489,884	+		PFLU_RS19835	0.78	-1.4
4,489,884	+		PFLU_RS19835	0.78	+0.5
4,489,884	+		PFLU_RS19835	0.78	+1.0
4,489,884	+		PFLU_RS19835	0.78	+0.8
4,489,884	+		PFLU_RS19835	0.78	-0.6
4,489,885	-		PFLU_RS19835	0.78	+0.6
4,489,885	-		PFLU_RS19835	0.78	-0.3
4,489,885	-		PFLU_RS19835	0.78	-1.2
4,489,920	+		PFLU_RS19835	0.82	-0.6
4,489,921	-		PFLU_RS19835	0.82	-1.4
4,489,921	-		PFLU_RS19835	0.82	+1.0
4,489,927	-		PFLU_RS19835	0.83	-0.4
4,489,957	-		PFLU_RS19835	0.86	-0.3
4,489,957	-		PFLU_RS19835	0.86	+0.4