Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS14220

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
3,179,007	+		PFLU_RS14215	0.32	+1.2
3,179,007	+		PFLU_RS14215	0.32	+0.7
3,179,034	+		PFLU_RS14215	0.34	-0.3
3,179,034	+		PFLU_RS14215	0.34	-2.4
3,179,034	+		PFLU_RS14215	0.34	+1.1
3,179,035	-		PFLU_RS14215	0.34	+0.1
3,179,035	-		PFLU_RS14215	0.34	-0.9
3,179,035	-		PFLU_RS14215	0.34	-1.9
3,179,055	+		PFLU_RS14215	0.36	+0.1
3,179,055	+		PFLU_RS14215	0.36	-0.2
3,179,055	+		PFLU_RS14215	0.36	+1.2
3,179,055	+		PFLU_RS14215	0.36	-0.6
3,179,055	+		PFLU_RS14215	0.36	-0.8
3,179,056	-		PFLU_RS14215	0.36	+0.4
3,179,056	-		PFLU_RS14215	0.36	+1.1
3,179,238	+		PFLU_RS14215	0.49	+0.3
3,179,238	+		PFLU_RS14215	0.49	-0.9
3,179,238	+		PFLU_RS14215	0.49	-2.4
3,179,238	+		PFLU_RS14215	0.49	+0.3
3,179,238	+		PFLU_RS14215	0.49	-0.8
3,179,238	+		PFLU_RS14215	0.49	-0.0
3,179,239	-		PFLU_RS14215	0.49	+1.8
3,179,239	-		PFLU_RS14215	0.49	+1.1
3,179,239	-		PFLU_RS14215	0.49	-1.0
3,179,239	-		PFLU_RS14215	0.49	-0.2
3,179,239	-		PFLU_RS14215	0.49	+1.4
3,179,239	-		PFLU_RS14215	0.49	+0.4
3,179,239	-		PFLU_RS14215	0.49	+0.2
3,179,379	+		PFLU_RS14215	0.60	-1.2
3,179,379	+		PFLU_RS14215	0.60	+0.6
3,179,380	-		PFLU_RS14215	0.60	-1.3
3,179,380	-		PFLU_RS14215	0.60	-0.8
3,179,380	-		PFLU_RS14215	0.60	-0.8
3,179,481	+		PFLU_RS14215	0.67	-0.6
3,179,481	+		PFLU_RS14215	0.67	-0.2
3,179,481	+		PFLU_RS14215	0.67	+0.2
3,179,481	+		PFLU_RS14215	0.67	+0.1
3,179,481	+		PFLU_RS14215	0.67	-0.2
3,179,481	+		PFLU_RS14215	0.67	-0.9
3,179,481	+		PFLU_RS14215	0.67	-0.1
3,179,481	+		PFLU_RS14215	0.67	-2.2
3,179,481	+		PFLU_RS14215	0.67	-0.5
3,179,481	+		PFLU_RS14215	0.67	-0.3
3,179,481	+		PFLU_RS14215	0.67	-0.1
3,179,481	+		PFLU_RS14215	0.67	+1.1
3,179,482	-		PFLU_RS14215	0.67	+0.2
3,179,482	-		PFLU_RS14215	0.67	+2.2
3,179,482	-		PFLU_RS14215	0.67	+0.7
3,179,482	-		PFLU_RS14215	0.67	+0.6
3,179,482	-		PFLU_RS14215	0.67	-0.8
3,179,482	-		PFLU_RS14215	0.67	-0.6
3,179,482	-		PFLU_RS14215	0.67	+0.2
3,179,482	-		PFLU_RS14215	0.67	-0.2
3,179,482	-		PFLU_RS14215	0.67	-0.6
3,179,482	-		PFLU_RS14215	0.67	+0.3
3,179,482	-		PFLU_RS14215	0.67	-0.2
3,179,526	+		PFLU_RS14215	0.71	+0.2
3,179,526	+		PFLU_RS14215	0.71	-0.4
3,179,527	-		PFLU_RS14215	0.71	-0.2
3,179,532	+		PFLU_RS14215	0.71	-0.2
3,179,532	+		PFLU_RS14215	0.71	-0.6
3,179,628	+		PFLU_RS14215	0.78	-0.6
3,179,628	+		PFLU_RS14215	0.78	+0.0
3,179,628	+		PFLU_RS14215	0.78	-2.0
3,179,628	+		PFLU_RS14215	0.78	-0.6
3,179,628	+		PFLU_RS14215	0.78	-1.8
3,179,628	+		PFLU_RS14215	0.78	-0.5
3,179,628	+		PFLU_RS14215	0.78	-1.1
3,179,628	+		PFLU_RS14215	0.78	-0.3
3,179,628	+		PFLU_RS14215	0.78	+1.8
3,179,628	+		PFLU_RS14215	0.78	+0.8
3,179,628	+		PFLU_RS14215	0.78	+0.8
3,179,628	+		PFLU_RS14215	0.78	-0.4
3,179,629	-		PFLU_RS14215	0.78	+0.2
3,179,629	-		PFLU_RS14215	0.78	-1.0
3,179,629	-		PFLU_RS14215	0.78	-1.4
3,179,629	-		PFLU_RS14215	0.78	-0.8
3,179,629	-		PFLU_RS14215	0.78	-1.1
3,179,629	-		PFLU_RS14215	0.78	-1.8
3,179,661	+		PFLU_RS14215	0.81	+1.8
3,179,661	+		PFLU_RS14215	0.81	+0.2
3,179,661	+		PFLU_RS14215	0.81	+1.6
3,179,661	+		PFLU_RS14215	0.81	+0.1
3,179,662	-		PFLU_RS14215	0.81	-1.6
3,179,681	+		PFLU_RS14215	0.82	+0.4
3,179,682	-		PFLU_RS14215	0.82	+0.5
3,179,917	-				+0.9
3,179,981	+				-0.0
3,180,080	+		PFLU_RS14220	0.12	-2.0
3,180,080	+		PFLU_RS14220	0.12	+1.6
3,180,081	-		PFLU_RS14220	0.12	+0.8
3,180,081	-		PFLU_RS14220	0.12	-0.1
3,180,081	-		PFLU_RS14220	0.12	-2.0
3,180,081	-		PFLU_RS14220	0.12	+0.2
3,180,110	+		PFLU_RS14220	0.16	-0.2
3,180,110	+		PFLU_RS14220	0.16	+0.4
3,180,110	+		PFLU_RS14220	0.16	-0.4
3,180,110	+		PFLU_RS14220	0.16	+0.1
3,180,110	+		PFLU_RS14220	0.16	+0.4
3,180,111	-		PFLU_RS14220	0.16	-1.2
3,180,111	-		PFLU_RS14220	0.16	+0.5
3,180,111	-		PFLU_RS14220	0.16	-0.8
3,180,111	-		PFLU_RS14220	0.16	+0.6
3,180,245	+		PFLU_RS14220	0.32	-1.5
3,180,245	+		PFLU_RS14220	0.32	-1.5
3,180,245	+		PFLU_RS14220	0.32	-1.5
3,180,246	-		PFLU_RS14220	0.32	+0.7
3,180,246	-		PFLU_RS14220	0.32	+0.8
3,180,263	+		PFLU_RS14220	0.35	-1.5
3,180,450	-		PFLU_RS14220	0.57	+1.2
3,180,572	+		PFLU_RS14220	0.72	+1.0
3,180,572	+		PFLU_RS14220	0.72	+0.1
3,180,572	+		PFLU_RS14220	0.72	+0.6
3,180,573	-		PFLU_RS14220	0.72	+0.8
3,180,573	-		PFLU_RS14220	0.72	-0.1
3,180,573	-		PFLU_RS14220	0.72	+0.1
3,180,573	-		PFLU_RS14220	0.72	-0.0
3,180,593	+		PFLU_RS14220	0.75	-1.5
3,180,594	-		PFLU_RS14220	0.75	-0.4
3,180,594	-		PFLU_RS14220	0.75	+1.8
3,180,686	+		PFLU_RS14220	0.86	+0.2
3,180,686	+		PFLU_RS14220	0.86	-0.4
3,180,687	-		PFLU_RS14220	0.86	-1.5
3,180,827	+				-0.8
3,180,828	-				+1.2
3,180,921	-				+0.2
3,180,944	+				-0.8
3,180,944	+				-1.3
3,180,944	+				+0.5
3,180,944	+				-0.2
3,180,987	+		PFLU_RS14225	0.12	-2.4
3,181,070	+		PFLU_RS14225	0.19	+0.8
3,181,070	+		PFLU_RS14225	0.19	-0.2
3,181,071	-		PFLU_RS14225	0.19	-0.2
3,181,216	-		PFLU_RS14225	0.30	+0.0
3,181,216	-		PFLU_RS14225	0.30	-0.3
3,181,319	+		PFLU_RS14225	0.38	+0.0
3,181,319	+		PFLU_RS14225	0.38	-1.3
3,181,320	-		PFLU_RS14225	0.38	-0.1
3,181,369	+		PFLU_RS14225	0.42	+1.1
3,181,369	+		PFLU_RS14225	0.42	+0.2
3,181,369	+		PFLU_RS14225	0.42	+1.7
3,181,369	+		PFLU_RS14225	0.42	-0.4
3,181,370	-		PFLU_RS14225	0.42	-0.4
3,181,370	-		PFLU_RS14225	0.42	-0.2
3,181,370	-		PFLU_RS14225	0.42	+1.4
3,181,370	-		PFLU_RS14225	0.42	+0.8
3,181,370	-		PFLU_RS14225	0.42	-0.2
3,181,370	-		PFLU_RS14225	0.42	-0.2
3,181,581	+		PFLU_RS14225	0.58	+0.6
3,181,582	-		PFLU_RS14225	0.58	+0.2