Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03603

Experiment: PYE with Chloride 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloride 100 mM
3,756,084	+		CCNA_03602	0.28	+0.7
3,756,084	+		CCNA_03602	0.28	+0.8
3,756,084	+		CCNA_03602	0.28	+1.2
3,756,084	+		CCNA_03602	0.28	+2.2
3,756,092	-		CCNA_03602	0.29	-0.9
3,756,092	-		CCNA_03602	0.29	+0.3
3,756,137	-		CCNA_03602	0.32	-0.0
3,756,158	+		CCNA_03602	0.34	+0.3
3,756,164	-		CCNA_03602	0.35	+0.1
3,756,186	-		CCNA_03602	0.36	-0.9
3,756,190	+		CCNA_03602	0.37	-0.3
3,756,190	+		CCNA_03602	0.37	-0.4
3,756,190	+		CCNA_03602	0.37	+1.2
3,756,190	+		CCNA_03602	0.37	-0.9
3,756,196	-		CCNA_03602	0.37	+2.1
3,756,198	-		CCNA_03602	0.37	+0.8
3,756,198	-		CCNA_03602	0.37	+0.3
3,756,200	+		CCNA_03602	0.37	+0.8
3,756,200	+		CCNA_03602	0.37	+1.2
3,756,200	+		CCNA_03602	0.37	+0.1
3,756,208	-		CCNA_03602	0.38	-0.0
3,756,263	-		CCNA_03602	0.42	-0.9
3,756,263	-		CCNA_03602	0.42	-1.4
3,756,286	-		CCNA_03602	0.44	-1.6
3,756,290	+		CCNA_03602	0.44	-0.4
3,756,335	+		CCNA_03602	0.48	+1.1
3,756,379	+		CCNA_03602	0.51	+1.7
3,756,446	-		CCNA_03602	0.57	-0.5
3,756,463	+		CCNA_03602	0.58	+1.1
3,756,470	+		CCNA_03602	0.59	+0.5
3,756,496	-		CCNA_03602	0.61	+0.3
3,756,515	+		CCNA_03602	0.62	-1.3
3,756,590	+		CCNA_03602	0.68	-0.2
3,756,600	+		CCNA_03602	0.69	+0.9
3,756,600	+		CCNA_03602	0.69	+0.5
3,756,600	+		CCNA_03602	0.69	-0.1
3,756,664	+		CCNA_03602	0.74	+0.5
3,756,667	-		CCNA_03602	0.74	+0.6
3,756,667	-		CCNA_03602	0.74	-0.6
3,756,669	+		CCNA_03602	0.74	+0.1
3,756,682	-		CCNA_03602	0.75	+0.0
3,756,733	-		CCNA_03602	0.79	+0.7
3,756,771	+		CCNA_03602	0.82	+0.4
3,756,788	+		CCNA_03602	0.83	+0.3
3,756,790	-		CCNA_03602	0.84	-0.9
3,756,841	+		CCNA_03602	0.88	+0.3
3,756,850	-		CCNA_03602	0.88	-2.6
3,756,857	+		CCNA_03602	0.89	+2.5
3,756,857	+		CCNA_03602	0.89	+0.3
3,756,860	-		CCNA_03602	0.89	-0.3
3,756,873	+				+0.5
3,756,873	+				-0.1
3,756,884	+				-0.5
3,756,896	+				+1.4
3,756,896	+				-0.1
3,756,896	+				-0.0
3,756,896	+				-0.9
3,756,937	+				+1.3
3,756,984	+				+0.7
3,756,992	-				-1.1
3,757,032	-				-0.2
3,757,041	-				-0.3
3,757,047	+				-0.0
3,757,113	-				-1.4
3,757,138	+				+0.8
3,757,172	-				-1.7
3,757,178	+				-0.2
3,757,186	-				-1.1
3,757,327	+		CCNA_03603	0.15	+0.4
3,757,327	+		CCNA_03603	0.15	-0.0
3,757,327	+		CCNA_03603	0.15	+0.5
3,757,335	-		CCNA_03603	0.16	+1.3
3,757,335	-		CCNA_03603	0.16	+0.5
3,757,372	+		CCNA_03603	0.18	-1.2
3,757,375	-		CCNA_03603	0.18	+0.2
3,757,406	+				+0.8
3,757,414	-		CCNA_03603	0.20	-2.8
3,757,419	-		CCNA_03603	0.21	-0.3
3,757,419	-		CCNA_03603	0.21	-0.8
3,757,458	-		CCNA_03603	0.23	-1.3
3,757,475	+		CCNA_03603	0.24	+0.7
3,757,475	+		CCNA_03603	0.24	+0.4
3,757,507	+		CCNA_03603	0.26	+1.1
3,757,508	-		CCNA_03603	0.26	-0.7
3,757,515	-		CCNA_03603	0.26	-1.3
3,757,559	+		CCNA_03603	0.29	-0.9
3,757,569	+		CCNA_03603	0.29	-1.2
3,757,606	+		CCNA_03603	0.31	+1.1
3,757,606	+		CCNA_03603	0.31	-1.5
3,757,606	+		CCNA_03603	0.31	+1.0
3,757,606	+		CCNA_03603	0.31	+1.5
3,757,611	+		CCNA_03603	0.32	+1.7
3,757,611	+		CCNA_03603	0.32	+1.5
3,757,611	+		CCNA_03603	0.32	+0.5
3,757,611	+		CCNA_03603	0.32	+0.8
3,757,611	+		CCNA_03603	0.32	-0.1
3,757,614	-		CCNA_03603	0.32	-1.3
3,757,614	-		CCNA_03603	0.32	-2.2
3,757,619	-		CCNA_03603	0.32	-0.3
3,757,619	-		CCNA_03603	0.32	+0.9
3,757,619	-		CCNA_03603	0.32	-0.6
3,757,619	-		CCNA_03603	0.32	-3.4
3,757,645	+		CCNA_03603	0.34	+0.1
3,757,646	+		CCNA_03603	0.34	-0.4
3,757,684	-		CCNA_03603	0.36	+1.3
3,757,684	-		CCNA_03603	0.36	-0.1
3,757,690	-		CCNA_03603	0.36	+1.8
3,757,703	+		CCNA_03603	0.37	+0.6
3,757,703	+		CCNA_03603	0.37	-0.2
3,757,731	-		CCNA_03603	0.39	-0.2
3,757,731	-		CCNA_03603	0.39	-0.5
3,757,810	-		CCNA_03603	0.43	+2.3
3,757,897	-		CCNA_03603	0.48	-1.1
3,757,917	-		CCNA_03603	0.49	+1.1
3,757,948	-		CCNA_03603	0.51	-1.2
3,757,999	-		CCNA_03603	0.54	+2.9
3,758,009	+		CCNA_03603	0.55	+0.2
3,758,009	+		CCNA_03603	0.55	-0.1
3,758,027	-		CCNA_03603	0.56	-1.7
3,758,030	-		CCNA_03603	0.56	+0.5
3,758,064	+		CCNA_03603	0.58	-1.2
3,758,112	+		CCNA_03603	0.61	+1.1
3,758,120	-		CCNA_03603	0.61	-1.1
3,758,120	-		CCNA_03603	0.61	+0.1
3,758,133	+		CCNA_03603	0.62	-1.2
3,758,149	+		CCNA_03603	0.63	-0.1
3,758,162	+		CCNA_03603	0.64	+0.4
3,758,181	+		CCNA_03603	0.65	-0.2
3,758,305	+		CCNA_03603	0.72	-1.2
3,758,438	+		CCNA_03603	0.80	-0.8
3,758,441	+		CCNA_03603	0.80	+0.1
3,758,446	-		CCNA_03603	0.80	+0.7
3,758,446	-		CCNA_03603	0.80	+0.2
3,758,463	+		CCNA_03603	0.81	+0.3
3,758,482	+		CCNA_03603	0.82	+0.9
3,758,490	-		CCNA_03603	0.83	-0.6
3,758,528	+		CCNA_03603	0.85	-0.1
3,758,533	+		CCNA_03603	0.85	-1.2
3,758,597	-		CCNA_03603	0.89	+0.9
3,758,604	+		CCNA_03603	0.89	+0.2
3,758,604	+		CCNA_03603	0.89	+1.3
3,758,612	-		CCNA_03603	0.90	+0.5
3,758,612	-		CCNA_03603	0.90	+1.8
3,758,632	-				+2.1
3,758,649	-				+0.8
3,758,688	+				+0.4
3,758,791	-				-0.5
3,758,791	-				+3.1
3,758,821	-				+0.4
3,758,869	+				+0.9
3,758,870	-				+0.0
3,758,877	-				+0.0
3,758,877	-				+0.6
3,758,877	-				+2.6
3,758,877	-				+0.6
3,758,880	+				-0.7
3,758,888	-				+0.2
3,758,909	-		CCNA_03604	0.11	-0.3
3,758,931	+		CCNA_03604	0.17	-0.8
3,758,938	+		CCNA_03604	0.19	-2.2
3,758,952	-		CCNA_03604	0.24	+2.2
3,758,959	+		CCNA_03604	0.26	-0.7
3,758,987	+		CCNA_03604	0.34	+0.6
3,759,049	+		CCNA_03604	0.52	-0.7
3,759,089	+		CCNA_03604	0.64	-0.2
3,759,113	+		CCNA_03604	0.71	-0.3
3,759,135	+		CCNA_03604	0.78	+1.2
3,759,166	+		CCNA_03604	0.87	-1.3
3,759,179	+				-0.9
3,759,185	-				+1.3
3,759,232	-				+0.6
3,759,236	+				-1.3
3,759,300	-				+0.1
3,759,300	-				-0.8
3,759,328	-				-0.4
3,759,328	-				+0.7
3,759,328	-				+0.1
3,759,332	+				-0.6
3,759,333	+				-0.9
3,759,420	-		CCNA_03605	0.14	-0.2
3,759,441	+		CCNA_03605	0.16	+0.3
3,759,506	+		CCNA_03605	0.23	-0.2
3,759,532	-		CCNA_03605	0.26	-1.2
3,759,615	-		CCNA_03605	0.36	-1.0
3,759,631	+		CCNA_03605	0.37	-0.6
3,759,655	+				+1.6
3,759,666	+		CCNA_03605	0.41	-1.0
3,759,679	-		CCNA_03605	0.43	-0.6
3,759,714	-		CCNA_03605	0.47	+1.4
3,759,752	+		CCNA_03605	0.51	-0.8
3,759,752	+		CCNA_03605	0.51	-1.2
3,759,754	-		CCNA_03605	0.51	+1.1