Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02858

Experiment: PYE with Chloride 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloride 100 mM
3,009,444	+				+0.3
3,009,452	-				+0.2
3,009,452	-				+1.2
3,009,452	-				+1.0
3,009,452	-				+0.4
3,009,459	+				+1.0
3,009,459	+				-0.4
3,009,459	+				-1.8
3,009,466	-				+0.2
3,009,467	-				+1.4
3,009,467	-				+0.5
3,009,467	-				-1.8
3,009,467	-				-0.6
3,009,474	+				+0.4
3,009,474	+				+0.5
3,009,498	+				+0.2
3,009,506	-				+0.6
3,009,528	-				-0.0
3,009,577	+				-0.5
3,009,577	+				+0.4
3,009,585	-				+2.1
3,009,585	-				+0.5
3,009,615	+				-0.6
3,009,616	+				+1.0
3,009,623	-				+0.6
3,009,690	+		CCNA_02856	0.22	+0.0
3,009,690	+		CCNA_02856	0.22	-1.2
3,009,690	+		CCNA_02856	0.22	-0.9
3,009,695	+		CCNA_02856	0.23	+0.5
3,009,698	-		CCNA_02856	0.23	+2.0
3,009,698	-		CCNA_02856	0.23	-2.4
3,009,698	-		CCNA_02856	0.23	-0.4
3,009,698	-		CCNA_02856	0.23	-0.5
3,009,698	-		CCNA_02856	0.23	-0.7
3,009,720	-		CCNA_02856	0.28	+1.2
3,009,735	-		CCNA_02856	0.31	-0.5
3,009,748	+		CCNA_02856	0.33	+1.3
3,009,748	+		CCNA_02856	0.33	+0.1
3,009,756	-		CCNA_02856	0.35	+0.6
3,009,769	-		CCNA_02856	0.37	-1.1
3,009,779	-		CCNA_02856	0.39	-1.1
3,009,819	+		CCNA_02856	0.47	-1.0
3,009,827	-		CCNA_02856	0.49	+1.9
3,009,835	-		CCNA_02856	0.50	+0.6
3,009,835	-		CCNA_02856	0.50	+0.1
3,009,835	-		CCNA_02856	0.50	-1.0
3,009,859	+		CCNA_02856	0.55	-0.4
3,009,859	+		CCNA_02856	0.55	+1.6
3,009,867	-		CCNA_02856	0.56	-0.0
3,009,867	-		CCNA_02856	0.56	+0.0
3,009,869	+		CCNA_02856	0.57	+1.8
3,009,871	+		CCNA_02856	0.57	+0.0
3,009,878	-		CCNA_02856	0.59	+2.1
3,009,898	+		CCNA_02856	0.63	+1.2
3,009,906	-		CCNA_02856	0.64	-0.5
3,009,906	-		CCNA_02856	0.64	+0.4
3,009,906	-		CCNA_02856	0.64	+1.1
3,009,919	+		CCNA_02856	0.67	-0.8
3,009,930	-		CCNA_02856	0.69	-0.3
3,009,941	-		CCNA_02856	0.71	+2.4
3,009,945	-		CCNA_02856	0.72	+0.7
3,009,953	-		CCNA_02856	0.73	+0.5
3,009,975	+		CCNA_02856	0.78	+0.3
3,010,011	+		CCNA_02856	0.85	+1.0
3,010,012	-		CCNA_02856	0.85	-0.3
3,010,018	+		CCNA_02856	0.86	+1.6
3,010,018	+		CCNA_02856	0.86	+0.3
3,010,018	+		CCNA_02856	0.86	+0.2
3,010,026	-		CCNA_02856	0.88	-0.3
3,010,026	-		CCNA_02856	0.88	-0.3
3,010,026	-		CCNA_02856	0.88	+0.4
3,010,073	+				+0.7
3,010,073	+				-1.2
3,010,081	-				+2.4
3,010,081	-				-0.8
3,010,104	-				-0.8
3,010,120	+				+1.1
3,010,128	-				-1.9
3,010,153	-				-0.7
3,010,155	+				-0.2
3,010,187	+				+0.1
3,010,187	+				+0.9
3,010,187	+				+0.2
3,010,187	+				+1.6
3,010,188	+				+0.1
3,010,195	-				-0.0
3,010,195	-				+0.4
3,010,195	-				-0.7
3,010,214	-				+0.3
3,010,217	+				+1.1
3,010,218	+				+0.7
3,010,218	+				+0.1
3,010,230	+				-0.3
3,010,235	+				-0.5
3,010,235	+				+0.8
3,010,243	-				+1.7
3,010,256	+				-0.4
3,010,264	-				-0.0
3,010,284	-				+0.4
3,010,313	+				+0.2
3,010,321	-				-1.5
3,010,321	-				+0.0
3,010,321	-				+2.8
3,010,326	-				+1.1
3,010,380	+				-1.0
3,010,380	+				+2.7
3,010,397	-				-0.6
3,010,429	-		CCNA_02858	0.11	-0.3
3,010,429	-		CCNA_02858	0.11	+1.8
3,010,429	-		CCNA_02858	0.11	+2.3
3,010,460	-		CCNA_02858	0.13	+0.0
3,010,460	-		CCNA_02858	0.13	-0.5
3,010,539	+		CCNA_02858	0.19	-0.2
3,010,587	+		CCNA_02858	0.23	+0.4
3,010,595	-		CCNA_02858	0.23	+0.9
3,010,596	-		CCNA_02858	0.23	+0.3
3,010,603	-		CCNA_02858	0.24	+1.4
3,010,603	-				+4.4
3,010,641	+		CCNA_02858	0.27	+0.3
3,010,649	-		CCNA_02858	0.27	-1.2
3,010,662	-		CCNA_02858	0.28	-0.8
3,010,712	-		CCNA_02858	0.32	+1.0
3,010,715	-		CCNA_02858	0.32	+2.0
3,010,715	-		CCNA_02858	0.32	+1.0
3,010,726	-		CCNA_02858	0.33	+0.6
3,010,847	+		CCNA_02858	0.43	+1.6
3,010,868	-		CCNA_02858	0.44	+1.7
3,010,898	+		CCNA_02858	0.46	-0.2
3,010,898	+		CCNA_02858	0.46	+1.0
3,010,906	-		CCNA_02858	0.47	+2.1
3,010,906	-		CCNA_02858	0.47	+1.4
3,010,906	-		CCNA_02858	0.47	+1.1
3,010,906	-		CCNA_02858	0.47	+1.6
3,010,906	-		CCNA_02858	0.47	+1.1
3,010,906	-		CCNA_02858	0.47	+0.9
3,010,927	+		CCNA_02858	0.49	+1.1
3,010,929	-		CCNA_02858	0.49	+1.2
3,010,946	-		CCNA_02858	0.50	+1.8
3,010,950	+		CCNA_02858	0.50	+1.0
3,011,000	-		CCNA_02858	0.54	+1.0
3,011,007	+		CCNA_02858	0.55	+0.5
3,011,016	-				+3.7
3,011,016	-		CCNA_02858	0.56	+1.1
3,011,018	+		CCNA_02858	0.56	-1.0
3,011,026	-		CCNA_02858	0.56	+0.2
3,011,026	-		CCNA_02858	0.56	+1.4
3,011,026	-		CCNA_02858	0.56	+0.9
3,011,062	+		CCNA_02858	0.59	+1.6
3,011,070	-		CCNA_02858	0.60	+1.2
3,011,116	+		CCNA_02858	0.63	+0.4
3,011,122	+		CCNA_02858	0.64	-2.2
3,011,124	-		CCNA_02858	0.64	+1.7
3,011,153	+		CCNA_02858	0.66	+1.4
3,011,153	+				+2.1
3,011,161	-		CCNA_02858	0.67	+0.7
3,011,161	-		CCNA_02858	0.67	+1.2
3,011,166	+		CCNA_02858	0.67	+0.6
3,011,181	+		CCNA_02858	0.68	-0.8
3,011,248	+		CCNA_02858	0.73	-0.8
3,011,253	+		CCNA_02858	0.74	+0.2
3,011,271	-		CCNA_02858	0.75	+0.9
3,011,271	-		CCNA_02858	0.75	+2.7
3,011,312	+		CCNA_02858	0.78	+0.1
3,011,318	-		CCNA_02858	0.79	+1.8
3,011,318	-		CCNA_02858	0.79	+0.7
3,011,320	-		CCNA_02858	0.79	+2.1
3,011,320	-		CCNA_02858	0.79	+1.0
3,011,332	-		CCNA_02858	0.80	+1.4
3,011,349	+		CCNA_02858	0.81	+0.8
3,011,357	-				+1.8
3,011,362	-		CCNA_02858	0.82	+0.3
3,011,362	-		CCNA_02858	0.82	+0.6
3,011,402	+		CCNA_02858	0.85	+0.3
3,011,402	+		CCNA_02858	0.85	+0.6
3,011,405	+		CCNA_02858	0.85	-0.5
3,011,444	-		CCNA_02858	0.88	+1.9
3,011,480	+				+0.5
3,011,504	+				-0.8
3,011,504	+				-0.7
3,011,507	-				+2.1
3,011,551	+				-1.2
3,011,554	-				-0.9
3,011,559	-				+0.9
3,011,559	-				+1.2
3,011,574	-				+0.3
3,012,132	+				-1.5
3,012,140	-				-1.3
3,012,201	+				-1.1
3,012,209	-				-0.6
3,012,215	+		CCNA_02860	0.10	+1.1
3,012,231	+		CCNA_02860	0.12	+3.1
3,012,282	-		CCNA_02860	0.18	+1.9
3,012,282	-		CCNA_02860	0.18	+0.8
3,012,350	+		CCNA_02860	0.25	-0.0
3,012,358	-		CCNA_02860	0.26	+1.3
3,012,358	-		CCNA_02860	0.26	+0.7
3,012,363	-		CCNA_02860	0.26	+0.5
3,012,389	+		CCNA_02860	0.29	-1.1
3,012,395	+		CCNA_02860	0.30	+1.3
3,012,479	+		CCNA_02860	0.38	+1.0
3,012,487	-		CCNA_02860	0.39	+0.5
3,012,501	+		CCNA_02860	0.41	+0.5
3,012,507	-		CCNA_02860	0.41	+1.0
3,012,508	-		CCNA_02860	0.41	+0.1
3,012,508	-		CCNA_02860	0.41	-0.3
3,012,508	-		CCNA_02860	0.41	-1.1
3,012,509	-		CCNA_02860	0.42	-0.2
3,012,509	-		CCNA_02860	0.42	+1.0