Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01981

Experiment: PYE with Chloride 100 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloride 100 mM
2,124,144	+				+1.3
2,124,183	+				+1.8
2,124,183	+				+1.4
2,124,200	+				-1.2
2,124,208	-				-0.0
2,124,250	+				+1.8
2,124,270	+				+1.0
2,124,270	+				+1.8
2,124,280	+				+1.1
2,124,287	-				-1.0
2,124,302	-		CCNA_01980	0.11	-0.1
2,124,304	+		CCNA_01980	0.11	+0.8
2,124,326	+		CCNA_01980	0.14	-0.6
2,124,334	-		CCNA_01980	0.15	+0.9
2,124,364	+		CCNA_01980	0.19	+0.7
2,124,364	+		CCNA_01980	0.19	+0.1
2,124,372	-		CCNA_01980	0.20	-1.5
2,124,382	-		CCNA_01980	0.21	-1.0
2,124,394	-		CCNA_01980	0.23	-0.5
2,124,420	-		CCNA_01980	0.26	+1.1
2,124,420	-		CCNA_01980	0.26	-1.3
2,124,522	+		CCNA_01980	0.39	-0.7
2,124,558	-		CCNA_01980	0.44	+1.8
2,124,589	+		CCNA_01980	0.48	-0.4
2,124,589	+		CCNA_01980	0.48	-1.1
2,124,589	+		CCNA_01980	0.48	-0.4
2,124,589	+		CCNA_01980	0.48	-0.7
2,124,589	+		CCNA_01980	0.48	+0.4
2,124,589	+		CCNA_01980	0.48	-0.5
2,124,597	-		CCNA_01980	0.49	+2.0
2,124,597	-		CCNA_01980	0.49	+2.2
2,124,627	-		CCNA_01980	0.53	+0.6
2,124,637	+		CCNA_01980	0.54	-1.4
2,124,665	-		CCNA_01980	0.58	+0.4
2,124,673	-		CCNA_01980	0.59	+0.2
2,124,724	-		CCNA_01980	0.66	-1.0
2,124,724	-		CCNA_01980	0.66	+0.3
2,124,760	+		CCNA_01980	0.70	-1.6
2,124,772	+		CCNA_01980	0.72	+0.1
2,124,772	+		CCNA_01980	0.72	-0.3
2,124,772	+		CCNA_01980	0.72	+1.0
2,124,772	+		CCNA_01980	0.72	+0.2
2,124,780	-		CCNA_01980	0.73	+0.8
2,124,822	+		CCNA_01980	0.79	+0.7
2,124,823	+		CCNA_01980	0.79	+0.2
2,124,825	-		CCNA_01980	0.79	+1.3
2,124,834	+		CCNA_01980	0.80	-0.5
2,124,839	+		CCNA_01980	0.81	-0.1
2,124,849	+		CCNA_01980	0.82	+1.0
2,124,849	+		CCNA_01980	0.82	-1.4
2,124,849	+		CCNA_01980	0.82	+1.3
2,124,905	+		CCNA_01980	0.89	-1.0
2,124,912	-				-0.3
2,124,912	-				+0.4
2,124,912	-				+1.9
2,124,913	-				+0.6
2,124,928	-				+0.1
2,125,019	-				-0.1
2,125,030	-				-1.6
2,125,060	+				-0.9
2,125,060	+				-0.3
2,125,060	+				+1.8
2,125,067	+				-0.6
2,125,075	-				+1.5
2,125,075	-				+1.9
2,125,075	-				+1.0
2,125,077	+				-1.8
2,125,083	+				+0.2
2,125,092	-				-1.0
2,125,125	+				+0.1
2,125,172	+				+0.6
2,125,229	-				+1.8
2,125,264	-		CCNA_01981	0.11	-0.2
2,125,265	+		CCNA_01981	0.12	-1.4
2,125,273	+		CCNA_01981	0.12	-0.9
2,125,288	+		CCNA_01981	0.13	-1.2
2,125,296	-		CCNA_01981	0.13	+0.6
2,125,352	+		CCNA_01981	0.16	-0.9
2,125,353	+		CCNA_01981	0.16	-0.7
2,125,368	+		CCNA_01981	0.16	+1.1
2,125,387	+		CCNA_01981	0.17	+0.3
2,125,395	-		CCNA_01981	0.17	+0.1
2,125,395	-		CCNA_01981	0.17	+1.3
2,125,395	-		CCNA_01981	0.17	-0.4
2,125,402	-		CCNA_01981	0.18	-2.0
2,125,420	+		CCNA_01981	0.19	+0.1
2,125,428	-		CCNA_01981	0.19	+0.1
2,125,438	-		CCNA_01981	0.19	+1.7
2,125,496	+		CCNA_01981	0.22	-0.5
2,125,496	+		CCNA_01981	0.22	-0.5
2,125,527	+		CCNA_01981	0.24	+2.3
2,125,560	+		CCNA_01981	0.25	-0.6
2,125,569	-		CCNA_01981	0.25	-1.4
2,125,569	-		CCNA_01981	0.25	-1.8
2,125,600	+		CCNA_01981	0.27	+1.7
2,125,605	+		CCNA_01981	0.27	+0.1
2,125,613	-		CCNA_01981	0.28	-1.7
2,125,654	+		CCNA_01981	0.29	-0.2
2,125,656	+		CCNA_01981	0.29	-1.5
2,125,695	+		CCNA_01981	0.31	-1.5
2,125,724	+		CCNA_01981	0.33	+0.8
2,125,732	+		CCNA_01981	0.33	-1.3
2,125,733	+		CCNA_01981	0.33	-1.5
2,125,739	+		CCNA_01981	0.33	-0.4
2,125,742	-		CCNA_01981	0.33	-1.8
2,125,761	+		CCNA_01981	0.34	-0.2
2,125,769	-		CCNA_01981	0.35	-1.5
2,125,774	+		CCNA_01981	0.35	-1.9
2,125,774	+		CCNA_01981	0.35	-0.2
2,125,779	+		CCNA_01981	0.35	-0.5
2,125,802	-		CCNA_01981	0.36	-2.0
2,125,860	+		CCNA_01981	0.39	+2.1
2,125,860	+		CCNA_01981	0.39	-0.7
2,125,947	-		CCNA_01981	0.43	-1.0
2,125,947	-		CCNA_01981	0.43	-0.3
2,125,950	+		CCNA_01981	0.43	-0.6
2,125,961	+		CCNA_01981	0.43	-0.4
2,125,966	+		CCNA_01981	0.44	-0.5
2,125,971	+		CCNA_01981	0.44	+0.1
2,125,974	-		CCNA_01981	0.44	-0.0
2,125,974	-		CCNA_01981	0.44	+0.7
2,125,974	-		CCNA_01981	0.44	-2.4
2,126,075	+		CCNA_01981	0.49	+0.6
2,126,083	-		CCNA_01981	0.49	-1.6
2,126,090	-		CCNA_01981	0.49	-1.1
2,126,098	-		CCNA_01981	0.50	-1.4
2,126,098	-		CCNA_01981	0.50	+0.1
2,126,098	-		CCNA_01981	0.50	+0.6
2,126,098	-		CCNA_01981	0.50	-0.3
2,126,136	+		CCNA_01981	0.52	+0.6
2,126,144	-		CCNA_01981	0.52	-0.9
2,126,198	-		CCNA_01981	0.54	-0.0
2,126,198	-		CCNA_01981	0.54	-0.6
2,126,207	+		CCNA_01981	0.55	+1.0
2,126,210	-		CCNA_01981	0.55	+0.1
2,126,254	-		CCNA_01981	0.57	-0.5
2,126,285	+		CCNA_01981	0.58	-0.8
2,126,306	+		CCNA_01981	0.59	-0.9
2,126,324	-		CCNA_01981	0.60	-0.9
2,126,324	-		CCNA_01981	0.60	+0.9
2,126,332	+		CCNA_01981	0.61	-0.4
2,126,336	+		CCNA_01981	0.61	+1.0
2,126,343	+		CCNA_01981	0.61	-1.9
2,126,346	-		CCNA_01981	0.61	-1.1
2,126,348	+		CCNA_01981	0.61	-0.0
2,126,351	-		CCNA_01981	0.61	-0.9
2,126,383	-		CCNA_01981	0.63	-1.0
2,126,394	+		CCNA_01981	0.63	-1.2
2,126,446	-		CCNA_01981	0.66	-1.4
2,126,470	-		CCNA_01981	0.67	-0.1
2,126,475	+		CCNA_01981	0.67	-1.6
2,126,491	+		CCNA_01981	0.68	-1.8
2,126,507	+				+2.6
2,126,509	-		CCNA_01981	0.69	+2.3
2,126,609	-		CCNA_01981	0.73	-1.7
2,126,637	+		CCNA_01981	0.75	-1.0
2,126,643	-		CCNA_01981	0.75	-0.2
2,126,686	-		CCNA_01981	0.77	-1.2
2,126,742	+		CCNA_01981	0.79	+0.8
2,126,750	-		CCNA_01981	0.80	-0.9
2,126,780	+		CCNA_01981	0.81	+0.8
2,126,788	-		CCNA_01981	0.81	-0.9
2,126,788	-		CCNA_01981	0.81	+0.4
2,126,801	+		CCNA_01981	0.82	-1.8
2,126,847	-		CCNA_01981	0.84	+2.1
2,126,941	-		CCNA_01981	0.88	+0.6
2,127,003	-				+0.2
2,127,026	+				+0.6
2,127,026	+				-0.9
2,127,034	-				+0.8
2,127,159	+				+0.2
2,127,183	+				-1.5
2,127,329	+		CCNA_03960	0.84	+1.7