Experiment: sodium fluoride 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21270 and ABZR86_RS21275 are separated by 60 nucleotides ABZR86_RS21275 and ABZR86_RS21280 are separated by 11 nucleotides ABZR86_RS21280 and ABZR86_RS21285 are separated by 30 nucleotides ABZR86_RS21285 and ABZR86_RS21290 are separated by 16 nucleotides
ABZR86_RS21270: ABZR86_RS21270 - transglutaminase-like domain-containing protein, at 222,332 to 223,864
_RS21270
ABZR86_RS21275: ABZR86_RS21275 - SPFH domain-containing protein, at 223,925 to 224,797
_RS21275
ABZR86_RS21280: ABZR86_RS21280 - hypothetical protein, at 224,809 to 225,006
_RS21280
ABZR86_RS21285: ABZR86_RS21285 - hypothetical protein, at 225,037 to 225,417
_RS21285
ABZR86_RS21290: ABZR86_RS21290 - CPBP family glutamic-type intramembrane protease, at 225,434 to 226,201
_RS21290
Position (kb) 224
225
226 Strain fitness (log2 ratio) -2
-1
0
1 at 223.917 kb on + strand at 223.917 kb on + strand at 223.917 kb on + strand at 223.917 kb on + strand at 224.150 kb on + strand, within ABZR86_RS21275 at 224.150 kb on + strand, within ABZR86_RS21275 at 224.150 kb on + strand, within ABZR86_RS21275 at 224.151 kb on - strand, within ABZR86_RS21275 at 224.198 kb on + strand, within ABZR86_RS21275 at 224.199 kb on - strand, within ABZR86_RS21275 at 224.331 kb on + strand, within ABZR86_RS21275 at 224.332 kb on - strand, within ABZR86_RS21275 at 224.332 kb on - strand, within ABZR86_RS21275 at 224.405 kb on + strand, within ABZR86_RS21275 at 224.405 kb on + strand, within ABZR86_RS21275 at 224.406 kb on - strand, within ABZR86_RS21275 at 224.406 kb on - strand, within ABZR86_RS21275 at 224.411 kb on + strand, within ABZR86_RS21275 at 224.412 kb on - strand, within ABZR86_RS21275 at 224.917 kb on + strand, within ABZR86_RS21280 at 224.918 kb on - strand, within ABZR86_RS21280 at 224.918 kb on - strand, within ABZR86_RS21280 at 224.921 kb on + strand, within ABZR86_RS21280 at 224.922 kb on - strand, within ABZR86_RS21280 at 225.005 kb on - strand at 225.005 kb on - strand at 225.163 kb on + strand, within ABZR86_RS21285 at 225.163 kb on + strand, within ABZR86_RS21285 at 225.335 kb on - strand, within ABZR86_RS21285 at 225.527 kb on + strand, within ABZR86_RS21290 at 225.660 kb on - strand, within ABZR86_RS21290 at 225.695 kb on + strand, within ABZR86_RS21290 at 225.771 kb on + strand, within ABZR86_RS21290 at 225.857 kb on + strand, within ABZR86_RS21290 at 225.857 kb on + strand, within ABZR86_RS21290 at 225.857 kb on + strand, within ABZR86_RS21290 at 225.858 kb on - strand, within ABZR86_RS21290 at 225.858 kb on - strand, within ABZR86_RS21290 at 225.956 kb on + strand, within ABZR86_RS21290 at 225.956 kb on + strand, within ABZR86_RS21290 at 225.956 kb on + strand, within ABZR86_RS21290 at 225.956 kb on + strand, within ABZR86_RS21290
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 40 mM remove 223,917 + -0.3 223,917 + +0.7 223,917 + +0.3 223,917 + -0.2 224,150 + ABZR86_RS21275 0.26 -0.8 224,150 + ABZR86_RS21275 0.26 -0.5 224,150 + ABZR86_RS21275 0.26 -0.5 224,151 - ABZR86_RS21275 0.26 -0.6 224,198 + ABZR86_RS21275 0.31 -0.2 224,199 - ABZR86_RS21275 0.31 -0.8 224,331 + ABZR86_RS21275 0.47 -0.2 224,332 - ABZR86_RS21275 0.47 +0.4 224,332 - ABZR86_RS21275 0.47 +0.3 224,405 + ABZR86_RS21275 0.55 -0.5 224,405 + ABZR86_RS21275 0.55 -0.0 224,406 - ABZR86_RS21275 0.55 -0.1 224,406 - ABZR86_RS21275 0.55 +0.2 224,411 + ABZR86_RS21275 0.56 -0.3 224,412 - ABZR86_RS21275 0.56 +0.4 224,917 + ABZR86_RS21280 0.55 +0.0 224,918 - ABZR86_RS21280 0.55 +0.2 224,918 - ABZR86_RS21280 0.55 +0.4 224,921 + ABZR86_RS21280 0.57 +0.2 224,922 - ABZR86_RS21280 0.57 +0.2 225,005 - -2.2 225,005 - -0.1 225,163 + ABZR86_RS21285 0.33 +0.2 225,163 + ABZR86_RS21285 0.33 -0.4 225,335 - ABZR86_RS21285 0.78 -0.0 225,527 + ABZR86_RS21290 0.12 +0.7 225,660 - ABZR86_RS21290 0.29 -0.7 225,695 + ABZR86_RS21290 0.34 -0.3 225,771 + ABZR86_RS21290 0.44 -0.4 225,857 + ABZR86_RS21290 0.55 +0.4 225,857 + ABZR86_RS21290 0.55 -0.2 225,857 + ABZR86_RS21290 0.55 -0.3 225,858 - ABZR86_RS21290 0.55 +0.5 225,858 - ABZR86_RS21290 0.55 +1.2 225,956 + ABZR86_RS21290 0.68 -2.7 225,956 + ABZR86_RS21290 0.68 +0.1 225,956 + ABZR86_RS21290 0.68 +0.5 225,956 + ABZR86_RS21290 0.68 +0.3
Or see this region's nucleotide sequence