Experiment: sodium fluoride 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21130 and ABZR86_RS21135 are separated by 176 nucleotides ABZR86_RS21135 and ABZR86_RS21140 are separated by 79 nucleotides
ABZR86_RS21130: ABZR86_RS21130 - PadR family transcriptional regulator, at 194,375 to 195,091
_RS21130
ABZR86_RS21135: ABZR86_RS21135 - siderophore-interacting protein, at 195,268 to 196,059
_RS21135
ABZR86_RS21140: ABZR86_RS21140 - DMT family transporter, at 196,139 to 197,062
_RS21140
ABZR86_RS21145: ABZR86_RS21145 - LysR family transcriptional regulator, at 197,052 to 197,957
_RS21145
Position (kb) 195
196
197 Strain fitness (log2 ratio) -2
-1
0
1 at 194.309 kb on + strand at 194.309 kb on + strand at 194.309 kb on + strand at 194.310 kb on - strand at 194.354 kb on + strand at 194.360 kb on - strand at 194.414 kb on + strand at 194.435 kb on + strand at 194.435 kb on + strand at 194.435 kb on + strand at 194.435 kb on + strand at 194.435 kb on + strand at 194.435 kb on + strand at 194.436 kb on - strand at 194.519 kb on + strand, within ABZR86_RS21130 at 194.762 kb on + strand, within ABZR86_RS21130 at 194.762 kb on + strand, within ABZR86_RS21130 at 194.835 kb on - strand, within ABZR86_RS21130 at 195.101 kb on - strand at 195.354 kb on + strand, within ABZR86_RS21135 at 195.354 kb on + strand, within ABZR86_RS21135 at 195.354 kb on + strand, within ABZR86_RS21135 at 195.526 kb on + strand, within ABZR86_RS21135 at 195.579 kb on - strand, within ABZR86_RS21135 at 195.691 kb on + strand, within ABZR86_RS21135 at 195.691 kb on + strand, within ABZR86_RS21135 at 195.691 kb on + strand, within ABZR86_RS21135 at 195.692 kb on - strand, within ABZR86_RS21135 at 195.692 kb on - strand, within ABZR86_RS21135 at 195.692 kb on - strand, within ABZR86_RS21135 at 195.692 kb on - strand, within ABZR86_RS21135 at 195.695 kb on + strand, within ABZR86_RS21135 at 195.695 kb on + strand, within ABZR86_RS21135 at 195.695 kb on + strand, within ABZR86_RS21135 at 195.695 kb on + strand, within ABZR86_RS21135 at 195.695 kb on + strand, within ABZR86_RS21135 at 195.695 kb on + strand, within ABZR86_RS21135 at 195.695 kb on + strand, within ABZR86_RS21135 at 195.695 kb on + strand, within ABZR86_RS21135 at 195.696 kb on - strand, within ABZR86_RS21135 at 195.696 kb on - strand, within ABZR86_RS21135 at 195.928 kb on + strand, within ABZR86_RS21135 at 196.021 kb on + strand at 196.057 kb on + strand at 196.058 kb on - strand at 196.102 kb on + strand at 196.102 kb on + strand at 196.102 kb on + strand at 196.102 kb on + strand at 196.103 kb on - strand at 196.103 kb on - strand at 196.340 kb on + strand, within ABZR86_RS21140 at 196.341 kb on - strand, within ABZR86_RS21140 at 196.385 kb on + strand, within ABZR86_RS21140 at 196.385 kb on + strand, within ABZR86_RS21140 at 196.385 kb on + strand, within ABZR86_RS21140 at 196.386 kb on - strand, within ABZR86_RS21140 at 196.880 kb on + strand, within ABZR86_RS21140 at 196.881 kb on - strand, within ABZR86_RS21140 at 196.940 kb on + strand, within ABZR86_RS21140 at 196.941 kb on - strand, within ABZR86_RS21140 at 196.941 kb on - strand, within ABZR86_RS21140
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 40 mM remove 194,309 + -0.3 194,309 + +0.5 194,309 + +1.6 194,310 - +0.1 194,354 + +0.5 194,360 - -0.2 194,414 + -0.3 194,435 + -0.6 194,435 + -0.1 194,435 + +0.1 194,435 + +0.2 194,435 + -0.4 194,435 + +0.2 194,436 - -0.3 194,519 + ABZR86_RS21130 0.20 -0.7 194,762 + ABZR86_RS21130 0.54 -0.8 194,762 + ABZR86_RS21130 0.54 -0.0 194,835 - ABZR86_RS21130 0.64 +0.8 195,101 - +0.1 195,354 + ABZR86_RS21135 0.11 +0.7 195,354 + ABZR86_RS21135 0.11 -0.7 195,354 + ABZR86_RS21135 0.11 +0.2 195,526 + ABZR86_RS21135 0.33 -0.5 195,579 - ABZR86_RS21135 0.39 +1.1 195,691 + ABZR86_RS21135 0.53 -0.4 195,691 + ABZR86_RS21135 0.53 +0.5 195,691 + ABZR86_RS21135 0.53 -0.1 195,692 - ABZR86_RS21135 0.54 +0.1 195,692 - ABZR86_RS21135 0.54 +0.4 195,692 - ABZR86_RS21135 0.54 -0.2 195,692 - ABZR86_RS21135 0.54 +0.3 195,695 + ABZR86_RS21135 0.54 +0.9 195,695 + ABZR86_RS21135 0.54 +0.0 195,695 + ABZR86_RS21135 0.54 +0.3 195,695 + ABZR86_RS21135 0.54 +0.0 195,695 + ABZR86_RS21135 0.54 +0.5 195,695 + ABZR86_RS21135 0.54 -0.6 195,695 + ABZR86_RS21135 0.54 -0.0 195,695 + ABZR86_RS21135 0.54 -0.0 195,696 - ABZR86_RS21135 0.54 +0.8 195,696 - ABZR86_RS21135 0.54 +0.1 195,928 + ABZR86_RS21135 0.83 -2.3 196,021 + +0.4 196,057 + -0.9 196,058 - +0.2 196,102 + +0.7 196,102 + +0.0 196,102 + -0.7 196,102 + +0.3 196,103 - -1.1 196,103 - +0.3 196,340 + ABZR86_RS21140 0.22 +0.2 196,341 - ABZR86_RS21140 0.22 +1.1 196,385 + ABZR86_RS21140 0.27 +0.0 196,385 + ABZR86_RS21140 0.27 -0.8 196,385 + ABZR86_RS21140 0.27 -0.5 196,386 - ABZR86_RS21140 0.27 -1.1 196,880 + ABZR86_RS21140 0.80 -1.6 196,881 - ABZR86_RS21140 0.80 +0.8 196,940 + ABZR86_RS21140 0.87 -0.1 196,941 - ABZR86_RS21140 0.87 +1.1 196,941 - ABZR86_RS21140 0.87 -0.4
Or see this region's nucleotide sequence