Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS10675

Experiment: sodium fluoride 40 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS10670 and ABZR86_RS10675 are separated by 82 nucleotidesABZR86_RS10675 and ABZR86_RS10680 are separated by 178 nucleotides ABZR86_RS10670: ABZR86_RS10670 - muramoyltetrapeptide carboxypeptidase, at 2,370,630 to 2,371,589 _RS10670 ABZR86_RS10675: ABZR86_RS10675 - bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II, at 2,371,672 to 2,372,763 _RS10675 ABZR86_RS10680: ABZR86_RS10680 - riboflavin synthase, at 2,372,942 to 2,373,586 _RS10680 Position (kb) 2371 2372 2373Strain fitness (log2 ratio) -1 0 1at 2371.621 kb on - strandat 2371.621 kb on - strandat 2372.786 kb on + strandat 2372.789 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction sodium fluoride 40 mM
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2,371,621 - +0.0
2,371,621 - -0.3
2,372,786 + -0.0
2,372,789 + -0.8

Or see this region's nucleotide sequence