Experiment: sodium fluoride 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08855 and ABZR86_RS08860 are separated by 207 nucleotides ABZR86_RS08860 and ABZR86_RS08865 are separated by 157 nucleotides ABZR86_RS08865 and ABZR86_RS08870 are separated by 14 nucleotides ABZR86_RS08870 and ABZR86_RS08875 are separated by 303 nucleotides
ABZR86_RS08855: ABZR86_RS08855 - replicative DNA helicase, at 1,978,916 to 1,980,310
_RS08855
ABZR86_RS08860: ABZR86_RS08860 - 50S ribosomal protein L9, at 1,980,518 to 1,980,967
_RS08860
ABZR86_RS08865: ABZR86_RS08865 - 30S ribosomal protein S18, at 1,981,125 to 1,981,355
_RS08865
ABZR86_RS08870: ABZR86_RS08870 - 30S ribosomal protein S6, at 1,981,370 to 1,981,810
_RS08870
ABZR86_RS08875: ABZR86_RS08875 - iron-sulfur cluster assembly accessory protein, at 1,982,114 to 1,982,440
_RS08875
Position (kb)
1981
1982 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1980.371 kb on + strand at 1980.371 kb on + strand at 1980.372 kb on - strand at 1980.372 kb on - strand at 1980.402 kb on - strand at 1980.402 kb on - strand at 1980.402 kb on - strand at 1980.402 kb on - strand at 1980.402 kb on - strand at 1980.414 kb on - strand at 1980.435 kb on - strand at 1980.463 kb on + strand at 1980.463 kb on + strand at 1980.463 kb on + strand at 1980.464 kb on - strand at 1980.519 kb on + strand at 1980.520 kb on - strand at 1980.520 kb on - strand at 1980.699 kb on + strand, within ABZR86_RS08860 at 1980.699 kb on + strand, within ABZR86_RS08860 at 1980.699 kb on + strand, within ABZR86_RS08860 at 1980.699 kb on + strand, within ABZR86_RS08860 at 1980.699 kb on + strand, within ABZR86_RS08860 at 1980.700 kb on - strand, within ABZR86_RS08860 at 1980.700 kb on - strand, within ABZR86_RS08860 at 1980.808 kb on - strand, within ABZR86_RS08860 at 1980.886 kb on + strand, within ABZR86_RS08860 at 1980.886 kb on + strand, within ABZR86_RS08860 at 1980.886 kb on + strand, within ABZR86_RS08860 at 1981.045 kb on + strand at 1981.046 kb on - strand at 1981.046 kb on - strand at 1981.046 kb on - strand at 1981.046 kb on - strand at 1981.046 kb on - strand at 1981.046 kb on - strand at 1981.046 kb on - strand at 1981.046 kb on - strand at 1981.089 kb on + strand at 1981.089 kb on + strand at 1981.089 kb on + strand at 1981.089 kb on + strand at 1981.090 kb on - strand at 1981.090 kb on - strand at 1981.090 kb on - strand at 1981.090 kb on - strand at 1981.090 kb on - strand at 1981.097 kb on - strand at 1981.103 kb on + strand at 1981.104 kb on - strand at 1981.104 kb on - strand at 1981.147 kb on + strand at 1981.147 kb on + strand at 1981.147 kb on + strand at 1981.148 kb on - strand, within ABZR86_RS08865 at 1981.924 kb on - strand at 1982.110 kb on + strand at 1982.110 kb on + strand at 1982.110 kb on + strand at 1982.110 kb on + strand at 1982.110 kb on + strand at 1982.110 kb on + strand at 1982.110 kb on + strand at 1982.110 kb on + strand at 1982.110 kb on + strand at 1982.112 kb on + strand at 1982.113 kb on - strand at 1982.113 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 40 mM remove 1,980,371 + +0.7 1,980,371 + -0.2 1,980,372 - +2.0 1,980,372 - -0.0 1,980,402 - -0.2 1,980,402 - +0.3 1,980,402 - +0.0 1,980,402 - +0.3 1,980,402 - -0.8 1,980,414 - -0.8 1,980,435 - +0.0 1,980,463 + -0.2 1,980,463 + +0.5 1,980,463 + +1.0 1,980,464 - +0.5 1,980,519 + -0.8 1,980,520 - -0.0 1,980,520 - -1.0 1,980,699 + ABZR86_RS08860 0.40 -0.7 1,980,699 + ABZR86_RS08860 0.40 +0.3 1,980,699 + ABZR86_RS08860 0.40 -0.6 1,980,699 + ABZR86_RS08860 0.40 +0.2 1,980,699 + ABZR86_RS08860 0.40 -1.5 1,980,700 - ABZR86_RS08860 0.40 -0.6 1,980,700 - ABZR86_RS08860 0.40 -0.9 1,980,808 - ABZR86_RS08860 0.64 -1.7 1,980,886 + ABZR86_RS08860 0.82 +0.1 1,980,886 + ABZR86_RS08860 0.82 -1.2 1,980,886 + ABZR86_RS08860 0.82 +0.3 1,981,045 + -0.5 1,981,046 - -0.1 1,981,046 - +0.7 1,981,046 - -2.6 1,981,046 - -0.5 1,981,046 - -1.1 1,981,046 - -0.4 1,981,046 - +1.4 1,981,046 - -0.9 1,981,089 + +0.1 1,981,089 + -1.8 1,981,089 + -1.5 1,981,089 + -0.6 1,981,090 - -0.9 1,981,090 - +0.2 1,981,090 - +0.1 1,981,090 - +0.7 1,981,090 - -0.6 1,981,097 - -1.1 1,981,103 + -0.5 1,981,104 - -0.1 1,981,104 - +0.1 1,981,147 + -0.8 1,981,147 + -0.2 1,981,147 + -2.1 1,981,148 - ABZR86_RS08865 0.10 -1.1 1,981,924 - +0.7 1,982,110 + +1.2 1,982,110 + +0.3 1,982,110 + +0.5 1,982,110 + +0.0 1,982,110 + +0.4 1,982,110 + -0.7 1,982,110 + +0.4 1,982,110 + +0.1 1,982,110 + -0.0 1,982,112 + -0.6 1,982,113 - +2.1 1,982,113 - -0.3
Or see this region's nucleotide sequence