Experiment: sodium fluoride 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03740 and ABZR86_RS03745 are separated by 134 nucleotides ABZR86_RS03745 and ABZR86_RS03750 are separated by 162 nucleotides ABZR86_RS03750 and ABZR86_RS03755 are separated by 8 nucleotides ABZR86_RS03755 and ABZR86_RS03760 are separated by 79 nucleotides
ABZR86_RS03740: ABZR86_RS03740 - response regulator transcription factor, at 816,448 to 816,861
_RS03740
ABZR86_RS03745: ABZR86_RS03745 - nuclear transport factor 2 family protein, at 816,996 to 817,508
_RS03745
ABZR86_RS03750: ABZR86_RS03750 - hypothetical protein, at 817,671 to 817,895
_RS03750
ABZR86_RS03755: ABZR86_RS03755 - TetR/AcrR family transcriptional regulator, at 817,904 to 818,512
_RS03755
ABZR86_RS03760: ABZR86_RS03760 - hypothetical protein, at 818,592 to 818,993
_RS03760
Position (kb) 817
818 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.755 kb on + strand, within ABZR86_RS03740 at 816.756 kb on - strand, within ABZR86_RS03740 at 816.756 kb on - strand, within ABZR86_RS03740 at 816.756 kb on - strand, within ABZR86_RS03740 at 816.756 kb on - strand, within ABZR86_RS03740 at 816.756 kb on - strand, within ABZR86_RS03740 at 816.791 kb on + strand, within ABZR86_RS03740 at 816.792 kb on - strand, within ABZR86_RS03740 at 816.792 kb on - strand, within ABZR86_RS03740 at 816.897 kb on - strand at 816.897 kb on - strand at 816.906 kb on - strand at 816.968 kb on + strand at 816.968 kb on + strand at 816.968 kb on + strand at 816.968 kb on + strand at 816.968 kb on + strand at 817.058 kb on + strand, within ABZR86_RS03745 at 817.058 kb on + strand, within ABZR86_RS03745 at 817.059 kb on - strand, within ABZR86_RS03745 at 817.069 kb on + strand, within ABZR86_RS03745 at 817.070 kb on - strand, within ABZR86_RS03745 at 817.070 kb on - strand, within ABZR86_RS03745 at 817.137 kb on + strand, within ABZR86_RS03745 at 817.138 kb on - strand, within ABZR86_RS03745 at 817.239 kb on + strand, within ABZR86_RS03745 at 817.335 kb on + strand, within ABZR86_RS03745 at 817.550 kb on - strand at 817.550 kb on - strand at 817.550 kb on - strand at 817.550 kb on - strand at 817.743 kb on + strand, within ABZR86_RS03750 at 817.743 kb on + strand, within ABZR86_RS03750 at 817.743 kb on + strand, within ABZR86_RS03750 at 817.744 kb on - strand, within ABZR86_RS03750 at 817.777 kb on - strand, within ABZR86_RS03750 at 817.866 kb on + strand, within ABZR86_RS03750 at 817.866 kb on + strand, within ABZR86_RS03750 at 817.875 kb on + strand at 817.876 kb on - strand at 817.995 kb on + strand, within ABZR86_RS03755 at 818.150 kb on + strand, within ABZR86_RS03755 at 818.150 kb on + strand, within ABZR86_RS03755 at 818.150 kb on + strand, within ABZR86_RS03755 at 818.151 kb on - strand, within ABZR86_RS03755 at 818.151 kb on - strand, within ABZR86_RS03755 at 818.346 kb on + strand, within ABZR86_RS03755 at 818.346 kb on + strand, within ABZR86_RS03755 at 818.346 kb on + strand, within ABZR86_RS03755 at 818.496 kb on + strand at 818.496 kb on + strand at 818.496 kb on + strand at 818.497 kb on - strand at 818.497 kb on - strand at 818.567 kb on + strand at 818.567 kb on + strand at 818.567 kb on + strand at 818.568 kb on - strand at 818.598 kb on + strand at 818.599 kb on - strand at 818.599 kb on - strand at 818.602 kb on + strand at 818.603 kb on - strand at 818.603 kb on - strand at 818.603 kb on - strand at 818.611 kb on + strand at 818.612 kb on - strand at 818.612 kb on - strand at 818.751 kb on + strand, within ABZR86_RS03760
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 40 mM remove 816,755 + ABZR86_RS03740 0.74 +1.0 816,755 + ABZR86_RS03740 0.74 -1.4 816,755 + ABZR86_RS03740 0.74 -0.4 816,755 + ABZR86_RS03740 0.74 -0.5 816,755 + ABZR86_RS03740 0.74 -0.1 816,755 + ABZR86_RS03740 0.74 -0.3 816,755 + ABZR86_RS03740 0.74 -0.3 816,755 + ABZR86_RS03740 0.74 +0.1 816,756 - ABZR86_RS03740 0.74 -0.5 816,756 - ABZR86_RS03740 0.74 -0.3 816,756 - ABZR86_RS03740 0.74 -0.0 816,756 - ABZR86_RS03740 0.74 +0.1 816,756 - ABZR86_RS03740 0.74 -0.5 816,791 + ABZR86_RS03740 0.83 -0.4 816,792 - ABZR86_RS03740 0.83 +0.6 816,792 - ABZR86_RS03740 0.83 -0.7 816,897 - -0.6 816,897 - -0.1 816,906 - -0.0 816,968 + +0.1 816,968 + +1.2 816,968 + -0.2 816,968 + -0.3 816,968 + +0.0 817,058 + ABZR86_RS03745 0.12 +0.4 817,058 + ABZR86_RS03745 0.12 -0.8 817,059 - ABZR86_RS03745 0.12 -0.8 817,069 + ABZR86_RS03745 0.14 +1.3 817,070 - ABZR86_RS03745 0.14 +2.0 817,070 - ABZR86_RS03745 0.14 +0.6 817,137 + ABZR86_RS03745 0.27 -0.5 817,138 - ABZR86_RS03745 0.28 +0.1 817,239 + ABZR86_RS03745 0.47 -1.0 817,335 + ABZR86_RS03745 0.66 -0.6 817,550 - -0.1 817,550 - -0.4 817,550 - +1.3 817,550 - +0.5 817,743 + ABZR86_RS03750 0.32 +0.7 817,743 + ABZR86_RS03750 0.32 +0.4 817,743 + ABZR86_RS03750 0.32 +0.1 817,744 - ABZR86_RS03750 0.32 +0.5 817,777 - ABZR86_RS03750 0.47 -0.1 817,866 + ABZR86_RS03750 0.87 -2.2 817,866 + ABZR86_RS03750 0.87 -0.2 817,875 + -0.3 817,876 - +0.1 817,995 + ABZR86_RS03755 0.15 -0.5 818,150 + ABZR86_RS03755 0.40 -0.4 818,150 + ABZR86_RS03755 0.40 -0.1 818,150 + ABZR86_RS03755 0.40 -0.5 818,151 - ABZR86_RS03755 0.41 +0.3 818,151 - ABZR86_RS03755 0.41 +1.0 818,346 + ABZR86_RS03755 0.73 -0.2 818,346 + ABZR86_RS03755 0.73 -0.6 818,346 + ABZR86_RS03755 0.73 +0.3 818,496 + -0.0 818,496 + +0.5 818,496 + -1.0 818,497 - -0.9 818,497 - -0.3 818,567 + +0.9 818,567 + -0.0 818,567 + -0.3 818,568 - -1.4 818,598 + +1.0 818,599 - -0.4 818,599 - -0.8 818,602 + +0.4 818,603 - +0.5 818,603 - -1.7 818,603 - +0.5 818,611 + +3.5 818,612 - +0.2 818,612 - +0.7 818,751 + ABZR86_RS03760 0.40 +0.0
Or see this region's nucleotide sequence