Experiment: sodium fluoride 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02995 and ABZR86_RS03000 are separated by 420 nucleotides ABZR86_RS03000 and ABZR86_RS03005 are separated by 22 nucleotides ABZR86_RS03005 and ABZR86_RS03010 overlap by 4 nucleotides
ABZR86_RS02995: ABZR86_RS02995 - hypothetical protein, at 612,594 to 613,526
_RS02995
ABZR86_RS03000: ABZR86_RS03000 - SDR family oxidoreductase, at 613,947 to 614,951
_RS03000
ABZR86_RS03005: ABZR86_RS03005 - YetF domain-containing protein, at 614,974 to 615,441
_RS03005
ABZR86_RS03010: ABZR86_RS03010 - cation diffusion facilitator family transporter, at 615,438 to 616,406
_RS03010
Position (kb) 613
614
615 Strain fitness (log2 ratio) -2
-1
0
1 at 613.034 kb on + strand, within ABZR86_RS02995 at 613.034 kb on + strand, within ABZR86_RS02995 at 613.035 kb on - strand, within ABZR86_RS02995 at 613.083 kb on + strand, within ABZR86_RS02995 at 613.087 kb on + strand, within ABZR86_RS02995 at 613.088 kb on - strand, within ABZR86_RS02995 at 613.088 kb on - strand, within ABZR86_RS02995 at 613.232 kb on - strand, within ABZR86_RS02995 at 613.237 kb on + strand, within ABZR86_RS02995 at 613.237 kb on + strand, within ABZR86_RS02995 at 613.246 kb on + strand, within ABZR86_RS02995 at 613.246 kb on + strand, within ABZR86_RS02995 at 613.247 kb on - strand, within ABZR86_RS02995 at 613.250 kb on + strand, within ABZR86_RS02995 at 613.251 kb on - strand, within ABZR86_RS02995 at 613.306 kb on - strand, within ABZR86_RS02995 at 613.407 kb on + strand, within ABZR86_RS02995 at 613.435 kb on + strand at 613.579 kb on + strand at 613.580 kb on - strand at 614.194 kb on - strand, within ABZR86_RS03000 at 614.525 kb on + strand, within ABZR86_RS03000 at 614.525 kb on + strand, within ABZR86_RS03000 at 614.526 kb on - strand, within ABZR86_RS03000 at 614.526 kb on - strand, within ABZR86_RS03000 at 614.526 kb on - strand, within ABZR86_RS03000 at 614.665 kb on - strand, within ABZR86_RS03000 at 614.871 kb on + strand at 614.871 kb on + strand at 614.875 kb on + strand at 614.876 kb on - strand at 614.876 kb on - strand at 614.876 kb on - strand at 614.876 kb on - strand at 614.876 kb on - strand at 614.904 kb on + strand at 614.904 kb on + strand at 614.905 kb on - strand at 614.963 kb on + strand at 614.964 kb on - strand at 615.005 kb on - strand at 615.005 kb on - strand at 615.005 kb on - strand at 615.034 kb on + strand, within ABZR86_RS03005 at 615.720 kb on + strand, within ABZR86_RS03010 at 615.780 kb on + strand, within ABZR86_RS03010 at 615.781 kb on - strand, within ABZR86_RS03010
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 40 mM remove 613,034 + ABZR86_RS02995 0.47 +0.2 613,034 + ABZR86_RS02995 0.47 +0.6 613,035 - ABZR86_RS02995 0.47 -0.6 613,083 + ABZR86_RS02995 0.52 +0.1 613,087 + ABZR86_RS02995 0.53 +1.0 613,088 - ABZR86_RS02995 0.53 -1.0 613,088 - ABZR86_RS02995 0.53 -0.5 613,232 - ABZR86_RS02995 0.68 +0.7 613,237 + ABZR86_RS02995 0.69 +0.6 613,237 + ABZR86_RS02995 0.69 -0.1 613,246 + ABZR86_RS02995 0.70 -0.2 613,246 + ABZR86_RS02995 0.70 +0.2 613,247 - ABZR86_RS02995 0.70 +0.3 613,250 + ABZR86_RS02995 0.70 +0.7 613,251 - ABZR86_RS02995 0.70 +0.1 613,306 - ABZR86_RS02995 0.76 +0.2 613,407 + ABZR86_RS02995 0.87 +0.6 613,435 + -0.1 613,579 + +0.3 613,580 - -0.4 614,194 - ABZR86_RS03000 0.25 +0.3 614,525 + ABZR86_RS03000 0.58 +0.8 614,525 + ABZR86_RS03000 0.58 -0.1 614,526 - ABZR86_RS03000 0.58 -0.2 614,526 - ABZR86_RS03000 0.58 -0.1 614,526 - ABZR86_RS03000 0.58 +1.6 614,665 - ABZR86_RS03000 0.71 +0.8 614,871 + +0.6 614,871 + -0.3 614,875 + +0.9 614,876 - -0.4 614,876 - -0.3 614,876 - -0.1 614,876 - +0.2 614,876 - -0.7 614,904 + -1.4 614,904 + +0.3 614,905 - -2.3 614,963 + +0.4 614,964 - -0.2 615,005 - -0.3 615,005 - +0.3 615,005 - +1.2 615,034 + ABZR86_RS03005 0.13 +0.9 615,720 + ABZR86_RS03010 0.29 -0.7 615,780 + ABZR86_RS03010 0.35 -0.1 615,781 - ABZR86_RS03010 0.35 +0.2
Or see this region's nucleotide sequence