Experiment: sodium fluoride 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01895 and ABZR86_RS01900 are separated by 117 nucleotides ABZR86_RS01900 and ABZR86_RS01905 are separated by 12 nucleotides
ABZR86_RS01895: ABZR86_RS01895 - MFS transporter, at 411,935 to 413,248
_RS01895
ABZR86_RS01900: ABZR86_RS01900 - DUF2461 domain-containing protein, at 413,366 to 414,052
_RS01900
ABZR86_RS01905: ABZR86_RS01905 - exodeoxyribonuclease I, at 414,065 to 415,516
_RS01905
Position (kb) 413
414
415 Strain fitness (log2 ratio) -2
-1
0
1
2 at 412.523 kb on + strand, within ABZR86_RS01895 at 412.524 kb on - strand, within ABZR86_RS01895 at 412.925 kb on + strand, within ABZR86_RS01895 at 412.926 kb on - strand, within ABZR86_RS01895 at 412.926 kb on - strand, within ABZR86_RS01895 at 412.926 kb on - strand, within ABZR86_RS01895 at 412.977 kb on - strand, within ABZR86_RS01895 at 412.977 kb on - strand, within ABZR86_RS01895 at 413.078 kb on + strand, within ABZR86_RS01895 at 413.078 kb on + strand, within ABZR86_RS01895 at 413.079 kb on - strand, within ABZR86_RS01895 at 413.079 kb on - strand, within ABZR86_RS01895 at 413.129 kb on + strand at 413.130 kb on - strand at 413.130 kb on - strand at 413.168 kb on + strand at 413.168 kb on + strand at 413.168 kb on + strand at 413.169 kb on - strand at 413.210 kb on + strand at 413.264 kb on - strand at 413.348 kb on + strand at 413.348 kb on + strand at 413.386 kb on + strand at 413.397 kb on + strand at 413.397 kb on + strand at 413.424 kb on + strand at 413.424 kb on + strand at 413.424 kb on + strand at 413.425 kb on - strand at 413.425 kb on - strand at 413.425 kb on - strand at 413.425 kb on - strand at 413.425 kb on - strand at 413.722 kb on + strand, within ABZR86_RS01900 at 413.723 kb on - strand, within ABZR86_RS01900 at 413.723 kb on - strand, within ABZR86_RS01900 at 413.730 kb on + strand, within ABZR86_RS01900 at 413.730 kb on + strand, within ABZR86_RS01900 at 413.730 kb on + strand, within ABZR86_RS01900 at 413.730 kb on + strand, within ABZR86_RS01900 at 413.731 kb on - strand, within ABZR86_RS01900 at 413.731 kb on - strand, within ABZR86_RS01900 at 413.731 kb on - strand, within ABZR86_RS01900 at 413.796 kb on + strand, within ABZR86_RS01900 at 413.797 kb on - strand, within ABZR86_RS01900 at 413.797 kb on - strand, within ABZR86_RS01900 at 413.797 kb on - strand, within ABZR86_RS01900 at 414.039 kb on + strand at 414.327 kb on + strand, within ABZR86_RS01905 at 414.433 kb on - strand, within ABZR86_RS01905 at 414.753 kb on + strand, within ABZR86_RS01905 at 414.753 kb on + strand, within ABZR86_RS01905 at 414.754 kb on - strand, within ABZR86_RS01905
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 40 mM remove 412,523 + ABZR86_RS01895 0.45 +0.8 412,524 - ABZR86_RS01895 0.45 -0.5 412,925 + ABZR86_RS01895 0.75 -0.9 412,926 - ABZR86_RS01895 0.75 +0.1 412,926 - ABZR86_RS01895 0.75 +0.0 412,926 - ABZR86_RS01895 0.75 +0.5 412,977 - ABZR86_RS01895 0.79 -0.2 412,977 - ABZR86_RS01895 0.79 +0.6 413,078 + ABZR86_RS01895 0.87 +0.8 413,078 + ABZR86_RS01895 0.87 -0.3 413,079 - ABZR86_RS01895 0.87 +0.1 413,079 - ABZR86_RS01895 0.87 +0.3 413,129 + +0.2 413,130 - -0.1 413,130 - +0.6 413,168 + +0.2 413,168 + +1.0 413,168 + -0.4 413,169 - +0.0 413,210 + +0.2 413,264 - +0.3 413,348 + -0.1 413,348 + -1.2 413,386 + +0.4 413,397 + +1.9 413,397 + +0.1 413,424 + +0.6 413,424 + -2.0 413,424 + -0.2 413,425 - -0.4 413,425 - -1.2 413,425 - -0.3 413,425 - -0.6 413,425 - -0.4 413,722 + ABZR86_RS01900 0.52 +1.0 413,723 - ABZR86_RS01900 0.52 +0.5 413,723 - ABZR86_RS01900 0.52 +0.7 413,730 + ABZR86_RS01900 0.53 +0.4 413,730 + ABZR86_RS01900 0.53 +0.1 413,730 + ABZR86_RS01900 0.53 -0.5 413,730 + ABZR86_RS01900 0.53 -0.2 413,731 - ABZR86_RS01900 0.53 +0.4 413,731 - ABZR86_RS01900 0.53 +0.2 413,731 - ABZR86_RS01900 0.53 -0.1 413,796 + ABZR86_RS01900 0.63 +0.0 413,797 - ABZR86_RS01900 0.63 -0.6 413,797 - ABZR86_RS01900 0.63 +0.8 413,797 - ABZR86_RS01900 0.63 +0.3 414,039 + +0.5 414,327 + ABZR86_RS01905 0.18 -0.4 414,433 - ABZR86_RS01905 0.25 +0.5 414,753 + ABZR86_RS01905 0.47 -0.9 414,753 + ABZR86_RS01905 0.47 -1.1 414,754 - ABZR86_RS01905 0.47 +0.5
Or see this region's nucleotide sequence